Streptomyces cynarae: N8I84_11055
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Entry
N8I84_11055 CDS
T09435
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
scyn
Streptomyces cynarae
Pathway
scyn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
N8I84_11055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scyn03400
]
N8I84_11055
Enzymes [BR:
scyn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
N8I84_11055
DNA repair and recombination proteins [BR:
scyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
N8I84_11055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
HEAT_PBS
Motif
Other DBs
NCBI-ProteinID:
UXY19194
LinkDB
All DBs
Position
unmamed1:complement(2349827..2350543)
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AA seq
238 aa
AA seq
DB search
MDSSSLARLDERITGCRACPRLVAWREEVAATKRAAFADWTYWGRPVPGFGPPDARLLVI
GLAPAAHGGNRTGRMFTGDRSGDVLYAALHDVGLASQPTSVSADDGLELYGVRVTAPVHC
APPANKPTPEERDTCRPWLVQELRLLRPSLRSVVALGAFGWQAALTALGEAGWAVPRPRP
AFGHGARVSLEGLELFGCFHVSQRNTFTGRLTPRMLRDVLRTAADAAGLPVGAVDDKP
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggacagcagcagcctcgcccggctggacgagcggatcacgggatgccgtgcctgcccg
cgcctggtcgcatggcgcgaggaggtggccgccacaaagcgcgccgcgttcgccgactgg
acgtactgggggcggccggtgccgggtttcggaccgccggacgcccggctgctcgtcatc
ggcctcgcccccgcggcccacggcggaaatcggaccggacggatgttcaccggagaccgc
tccggggacgtgctgtacgcggcgctgcacgacgtgggtctggcgtcgcagcccacgtcg
gtgtccgccgacgacggcctggagctgtacggcgtacgcgtcaccgctcccgtgcactgt
gctccgcccgcgaacaagccgacgcccgaggaacgggacacatgccgaccgtggctcgtg
caggagctgcgcctgctgcgtccgtcgctgcgatccgtggtcgcgctcggggccttcggc
tggcaggccgcgctgaccgcgctcggtgaggccggctgggcggttccccggccgcggccc
gccttcgggcacggggccagggtgtcactggaaggactggagctgttcggctgcttccac
gtcagccagcgcaacaccttcacgggccggctcacgccccggatgctgcgcgacgtactg
cgcacggcggcggacgcggcgggtctgccggtcggagccgtagacgacaagccctag
DBGET
integrated database retrieval system
