Streptomyces cynarae: N8I84_11530
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Entry
N8I84_11530 CDS
T09435
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
scyn
Streptomyces cynarae
Pathway
scyn03030
DNA replication
scyn03430
Mismatch repair
scyn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N8I84_11530 (dnaE)
03430 Mismatch repair
N8I84_11530 (dnaE)
03440 Homologous recombination
N8I84_11530 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scyn03032
]
N8I84_11530 (dnaE)
03400 DNA repair and recombination proteins [BR:
scyn03400
]
N8I84_11530 (dnaE)
Enzymes [BR:
scyn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N8I84_11530 (dnaE)
DNA replication proteins [BR:
scyn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
N8I84_11530 (dnaE)
DNA repair and recombination proteins [BR:
scyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
N8I84_11530 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Tsr1_G-like
Motif
Other DBs
NCBI-ProteinID:
UXY19279
UniProt:
A0ABY6DY03
LinkDB
All DBs
Position
unmamed1:complement(2449246..2452782)
Genome browser
AA seq
1178 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHIAMSDHGNLHGAYDFFHSAKKA
GITPIIGIEAYVAPESRRNKRKILWGQPHQKRDDVSGSGGYTHKTMWAVNRTGLHNLFRL
SSDAYAEGWLQKWPRMDKETIAQWSEGIVASTGCPSGEVQTRLRLGHFDEALKAAAEYQD
IFGKDKYFLELMDHGIEIERRVRDGLLEIGRKLGIPPLVTNDSHYTYAHEASAHDALLCI
QTGKNLSDPDRFKFDGTGYYLKSTEEMYAIDSSDAWQEGCENTRLIAEMVDTEGMFVKRD
LMPKFDIPEGYTEVTWFQEEVRRGMERRFPGGIPEDRMKQAEYEMDVIIQMGFPGYFLVV
ADFIMWAKKNGIAVGPGRGSAAGSIVAYALGITDLDPIPHGLIFERFLNPERISMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGTIKAKNAIKDSARVLGYPYAMGDRITKAMP
ADVLGKGIPLSGITDPSHPRYSEAGEVRGMYENEPDVKKVIDTARGVEGLVRQMGVHAAG
VIMSSETITEHVPVWVRHTDGVTITQWDYPSCESLGLLKMDFLGLRNLTIMDDAVKMVKA
NKGIDIDLLSLPLDDPTTFELLQRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMNSHTNYALRKNGQQEITPIHPELEAPLKEVLDVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPEELEKNFVIFQSGARKNGYSDEAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAYLKANHPAEYMAALLTSVKDDKDKSAVYLNECRRMGIRVLPPNVNES
ESNFAAQGDDVILFGLSAVRNVGSNVVESIIRCRKAKGKYASFPDYLDKVEAVVCNKRTT
ESLIKAGAFDSLGHTRKGLMAQYEPMIDNVVAVKRKEAEGQFDLFGGMEEESSEPGFGLD
VTFTDEEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGIAQLTGGEHADGAVVT
IGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVKGRLD
KREDVPRLVAMELMVPDLSNAGTNAPVVLTIPAVKVTPPMVSRLGEILSQHKGDSEVRIK
LQGPRKTTVLRLDRHRVKPDPALYGDLKVLLGPSCLAG
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaagccgccgttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctgaaggacatgttcaacgcgtgcaacgagatgggcatgacccacatcgcc
atgtccgaccacggcaacctccacggggcgtacgacttcttccactccgcgaagaaggcc
ggaatcacccccatcatcggcatcgaggcgtacgtcgcccccgagtcccggcgcaacaag
cgcaagatcctctggggccagccgcaccagaagagggacgacgtctcgggttccggtggt
tacacccacaagaccatgtgggcggtgaacaggaccggcctgcacaacctcttccgcctg
tcctccgacgcgtacgccgagggctggctgcagaagtggccccgcatggacaaggagacc
atcgcccagtggtccgaggggatcgtggcctccaccggatgcccctccggcgaggtgcag
acccggctgcgcctcggccacttcgacgaggccctgaaggcggccgccgagtaccaggac
atcttcggcaaggacaagtacttcctggagctgatggaccacggcatcgagatcgagcgc
cgggtccgcgacggcctgctcgagatcggcaggaagctcggcatcccgccgctggtcacc
aacgactcgcactacacgtacgcgcacgaggcgtccgcacacgacgccctgctgtgcatc
cagaccggcaagaacctctccgacccggaccgcttcaagttcgacggcacgggctactac
ctgaagtccacggaggagatgtacgccatcgactcctcggacgcctggcaggagggctgt
gagaacacccggctgatcgcggagatggtcgacaccgagggcatgttcgtcaagcgcgac
ctcatgcccaagttcgacatccccgagggctacaccgaggtcacctggttccaggaggag
gtccgccgcggcatggagcgccgcttcccgggcggcatccccgaggaccgcatgaagcag
gccgagtacgagatggacgtcatcatccagatggggttcccgggctacttcctcgtggtc
gccgacttcatcatgtgggccaagaagaacggcatcgcggtgggccccggccgcggctcg
gccgcaggctcgatcgtcgcctacgccctcggcatcaccgacctcgacccgatcccgcac
ggcctgatcttcgagcggttcctcaaccccgagcgcatctcgatgcccgatgtcgacatc
gacttcgacgagcgccggcgcgtcgaggtgatccggtacgtgacggagaagtacggcgcc
gacaaggtcgccatgatcggcacctacggcaccatcaaggccaagaacgcgatcaaggac
tccgcgcgcgtgctgggctacccgtacgcgatgggcgaccgcatcaccaaggccatgccc
gccgacgtcctcggcaagggcatcccgctgtccggtatcaccgacccgagccacccccgc
tactcggaggcgggcgaggtgcgcgggatgtacgagaacgagccggacgtgaagaaggtc
atcgacaccgccaggggcgtcgagggcctggtgcggcagatgggtgtgcacgcggccggc
gtgatcatgtccagcgagaccatcaccgagcacgtgcccgtctgggtcaggcacaccgac
ggcgtgaccatcacccagtgggactacccgagctgtgagtcgctcggcctgctgaagatg
gacttcctgggcctgcgcaacctcacgatcatggacgacgccgtcaagatggtgaaggcg
aacaaagggatcgacatcgatctcctgagcctcccgctcgacgaccccacgaccttcgag
ctgctccagcgcggcgacaccctcggcgtcttccagttcgacggcgggcccatgcgctcg
ctgctgcggctgatgaagcccgacaacttcgaagacatctccgccgtgtcggccctgtac
cggccgggcccgatgggcatgaactcccacacgaactacgcgctgcgcaagaacgggcag
caggagatcacgccgatccacccggagctggaggcgccgctcaaggaggtcctggacgtc
acctacggcctgatcgtctaccaggagcaggtgcagaaggccgcccagatcatcgccggc
tactcgctcggcgaggccgacatcctccgccgcgtgatgggcaagaagaagccggaggag
ctggagaagaacttcgtcatcttccagtcgggcgcccgcaagaacggctacagcgacgag
gcgatccaggcgctgtgggacgtgctggtcccgttcgccggctacgccttcaacaaggcc
cactcggccgcgtacggcctggtctcgtactggaccgcgtacctgaaggcgaaccacccc
gccgagtacatggccgcgctcctcacctcggtgaaggacgacaaggacaagtcggccgtc
tatctgaacgagtgccgtcgcatgggcatccgggtgctgccgccgaacgtcaacgagtcc
gagtcgaacttcgccgcgcagggcgacgacgtgatcctcttcggcctctccgccgtgcgc
aacgtcggttcgaacgtcgtcgagtcgatcatccgctgccgcaaggccaaggggaagtac
gcgtccttcccggactacctggacaaggtcgaggcggtcgtctgcaacaagcggacgacg
gaatcgctcatcaaggccggcgccttcgactccctcggccacacccgcaagggcctgatg
gcgcagtacgaaccgatgatcgacaacgtggtcgcggtcaagcgcaaggaggccgagggg
cagttcgacctgttcggcggcatggaggaggagagcagcgagcccggcttcggtctcgac
gtcaccttcaccgacgaggagtgggacaagacctatctgctcgcccaggagcgggagatg
ctcggtctgtacgtctccgaccacccgctcttcggcctcgagcacgtgctgtccgacaag
gccgacgcgggcatcgcccagctcaccggcggcgagcacgcggacggcgcggtcgtcacc
atcggcggcatcatctccggcctgcaacgcaagatgaccaagcagggcaacgcgtgggcg
atcgccacggtcgaggacctcgccggctccatcgagtgcatgttcttcccggcgacctac
cagttggtgtccacccaactcgtcgaggacgccgtggtgttcgtcaagggccgcctcgac
aagcgggaggacgtgccccggctggtcgcgatggaactgatggttccggacctgtccaac
gcgggcaccaacgcccccgtggtgctcaccatcccggccgtgaaggtcaccccgccgatg
gtcagccgcctcggcgagatcctcagccagcacaagggcgacagtgaggtgcggatcaag
ctccaggggccgcgcaagacgacggtcctgcgcctggaccgccaccgcgtcaagccggac
cccgccctctacggcgacctgaaggtccttctcggcccttcctgcctggcgggctga
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integrated database retrieval system
