KEGG   Streptomyces cynarae: N8I84_13505
Entry
N8I84_13505       CDS       T09435                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
scyn  Streptomyces cynarae
Pathway
scyn02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:scyn00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    N8I84_13505
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scyn03021]
    N8I84_13505
Transcription machinery [BR:scyn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     N8I84_13505
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 KORA HTH_28 LexA_DNA_bind
Other DBs
NCBI-ProteinID: UXY19633
UniProt: A0ABY6E6F3
LinkDB
Position
unmamed1:complement(2883500..2884630)
AA seq 376 aa
MQTQTLTQPDILNAEPAAEADVLPAVPPQNRLAHHPETEAEPEPPGPSELEEPLDAVEPA
EPVEALRDRADTGGPSSDLFRQYLREIGRIPLLTAAEEVELARRVEAGLFAEEKLLNTPD
LDTRLALDLDRLVVMGRMAKRRLIEANLRLVVSVAKRYVGRGLTMLDLVQEGNLGLIRAV
EKFDYARGYKFSTYATWWIRQAMSRALADQARTIRVPVHVVELINRVIRVQRRMLQERGY
EPTPEEVAAHLELPSERVSEVLRLAQEPVSLHAPVGEEDDVALGDLIEDGDATSPVESAA
FLLLREHLEAVLSTLGERERKVVQLRYGLVDGRPRTLEEIGRIFGVTRERIRQIESKTLN
KLRDHAFADQLRGYLD
NT seq 1131 nt   +upstreamnt  +downstreamnt
gtgcagacccagaccctcacccaaccggacatcctgaacgccgagccggccgcggaggcc
gacgtcctcccggcggttccgccgcagaaccggctcgcgcaccaccccgagacggaggcc
gagccggaaccaccgggcccgtccgagctcgaggagcccctcgacgccgtcgaacccgct
gaacccgtcgaagccctgcgcgaccgcgccgacaccggtggcccctcctccgacctgttc
cgccagtatctgcgcgagatcggccgcatcccgctgctgacggccgccgaggaggtcgaa
ctcgcccgccgcgtcgaagccggcctgttcgccgaggagaagctcctcaacacccccgac
ctggacacccggctggcgctcgacctggaccggctcgtcgtcatggggcgcatggccaag
cggcggctgatcgaggccaatctgcgtctcgtcgtctccgtcgccaagcgctacgtcggc
cgcgggctgaccatgctcgacctcgtacaggagggaaacctcggtctgatcagggcggtc
gagaagttcgactacgcccgcggctacaagttctccacgtacgcgacctggtggatccgt
caggccatgtcccgcgccctcgccgaccaggcccgcaccatccgtgtcccggtccatgtc
gtcgagctgatcaaccgggtcatccgcgtccagcgccggatgctccaggaacgcggctac
gaacccaccccggaagaggtcgccgcgcatctggagctgcccagcgagcgggtgagcgag
gtgctgcggctcgcccaggagcccgtctccctgcacgcccccgtcggcgaggaggacgac
gtggccctcggcgacctcatcgaggacggcgacgccaccagcccggtcgagtccgcggcg
ttcctgctgctcagggagcacctggaagcggtcctgtccacgctgggggagagggagcgc
aaggtcgtgcagctgcggtacggactcgtcgacggacgcccccgcaccctggaggagata
ggccgcatcttcggcgtcacccgcgaacgcatccgccagatcgagtccaagacgctgaac
aagctccgcgaccacgccttcgccgaccagctgaggggctacctggactga

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