Streptomyces cynarae: N8I84_13505
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Entry
N8I84_13505 CDS
T09435
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
scyn
Streptomyces cynarae
Pathway
scyn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
scyn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
N8I84_13505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scyn03021
]
N8I84_13505
Transcription machinery [BR:
scyn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
N8I84_13505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_28
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
UXY19633
UniProt:
A0ABY6E6F3
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All DBs
Position
unmamed1:complement(2883500..2884630)
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AA seq
376 aa
AA seq
DB search
MQTQTLTQPDILNAEPAAEADVLPAVPPQNRLAHHPETEAEPEPPGPSELEEPLDAVEPA
EPVEALRDRADTGGPSSDLFRQYLREIGRIPLLTAAEEVELARRVEAGLFAEEKLLNTPD
LDTRLALDLDRLVVMGRMAKRRLIEANLRLVVSVAKRYVGRGLTMLDLVQEGNLGLIRAV
EKFDYARGYKFSTYATWWIRQAMSRALADQARTIRVPVHVVELINRVIRVQRRMLQERGY
EPTPEEVAAHLELPSERVSEVLRLAQEPVSLHAPVGEEDDVALGDLIEDGDATSPVESAA
FLLLREHLEAVLSTLGERERKVVQLRYGLVDGRPRTLEEIGRIFGVTRERIRQIESKTLN
KLRDHAFADQLRGYLD
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
gtgcagacccagaccctcacccaaccggacatcctgaacgccgagccggccgcggaggcc
gacgtcctcccggcggttccgccgcagaaccggctcgcgcaccaccccgagacggaggcc
gagccggaaccaccgggcccgtccgagctcgaggagcccctcgacgccgtcgaacccgct
gaacccgtcgaagccctgcgcgaccgcgccgacaccggtggcccctcctccgacctgttc
cgccagtatctgcgcgagatcggccgcatcccgctgctgacggccgccgaggaggtcgaa
ctcgcccgccgcgtcgaagccggcctgttcgccgaggagaagctcctcaacacccccgac
ctggacacccggctggcgctcgacctggaccggctcgtcgtcatggggcgcatggccaag
cggcggctgatcgaggccaatctgcgtctcgtcgtctccgtcgccaagcgctacgtcggc
cgcgggctgaccatgctcgacctcgtacaggagggaaacctcggtctgatcagggcggtc
gagaagttcgactacgcccgcggctacaagttctccacgtacgcgacctggtggatccgt
caggccatgtcccgcgccctcgccgaccaggcccgcaccatccgtgtcccggtccatgtc
gtcgagctgatcaaccgggtcatccgcgtccagcgccggatgctccaggaacgcggctac
gaacccaccccggaagaggtcgccgcgcatctggagctgcccagcgagcgggtgagcgag
gtgctgcggctcgcccaggagcccgtctccctgcacgcccccgtcggcgaggaggacgac
gtggccctcggcgacctcatcgaggacggcgacgccaccagcccggtcgagtccgcggcg
ttcctgctgctcagggagcacctggaagcggtcctgtccacgctgggggagagggagcgc
aaggtcgtgcagctgcggtacggactcgtcgacggacgcccccgcaccctggaggagata
ggccgcatcttcggcgtcacccgcgaacgcatccgccagatcgagtccaagacgctgaac
aagctccgcgaccacgccttcgccgaccagctgaggggctacctggactga
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