Streptomyces cynarae: N8I84_23445
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Entry
N8I84_23445 CDS
T09435
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
scyn
Streptomyces cynarae
Pathway
scyn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scyn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N8I84_23445 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scyn03019
]
N8I84_23445 (recQ)
03400 DNA repair and recombination proteins [BR:
scyn03400
]
N8I84_23445 (recQ)
Enzymes [BR:
scyn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N8I84_23445 (recQ)
Messenger RNA biogenesis [BR:
scyn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N8I84_23445 (recQ)
DNA repair and recombination proteins [BR:
scyn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
N8I84_23445 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
UXY21317
LinkDB
All DBs
Position
unmamed1:5111111..5113102
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AA seq
663 aa
AA seq
DB search
MDGTAVMTEVGAPAVDGGSEALAALHRVFGYDAFRGEQEAVIEHVVAGGDAVVLMPTGGG
KSLCYQIPALVRPGTGVVVSPLIALMQDQVDALRALGVRAGFVNSTQDFDERRVMEAQFL
AGELDLLYLAPERLRLESTLDLLSRGKISVFAIDEAHCVSQWGHDFRPDYLALSLLGERW
PDVPRIALTATATRATHQEITQRLNMPRARHFVASFDRPNIQYRIVPKADPKKQLLAFLR
EEHAGDAGIVYCLSRNSVEKTAEFLTRNGIEAVPYHAGLDAATRAAHQSRFLREEGLVVV
ATIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWMAYGLNDVIQQRKL
IQSGEGDEAFRRRAQAHLDAMLALCETAQCRRGQLLAYFGQDPRPGGCGNCDTCLEPPDT
WDGTIAAQKVLSTVWRLHRERRQKFGAVQIVDILLGRRTAKVIQFDHDQLSVFGIGEELT
EGEWRGVIRQLLAQGLLAVEGEYGTLVLTEASGAVLRREREVPLRKEPKKPAAAPRSSSP
SARSDRKPKAAAAELPPELAPAFEALRAWRAEQAREQGVPAYVIFHDATLREIATAWPTS
VTQLGGISGIGEKKLATYGEGVVGVLASLGGPPTAQRAAAPSGGTEPDDWPEPDDEPEPD
DWI
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggacgggacggctgtgatgaccgaggtgggcgcgccggcggtggacggtgggagcgag
gcgctggccgcgctgcaccgggtcttcgggtacgacgccttccgcggcgagcaggaagcg
gtcatcgagcatgtggtcgcaggcggcgacgccgtcgtgctcatgccgaccggcggcggc
aagtcgctctgctaccagatcccggccctggtcaggcccggtacgggagtcgtggtctcc
ccgctcatcgctctcatgcaggaccaggtggacgccctgcgggcgctcggtgtgcgcgcc
gggttcgtcaactccacacaggacttcgacgagcggcgcgtgatggaggcgcagttcttg
gccggcgagctggacctgctctacctggcaccggagcggctgcgtctggagtccaccctc
gacctgctctcccgcggcaagatctccgtcttcgccatcgacgaggcgcactgcgtctcc
cagtggggccatgacttccgccccgactacctggcgctgtcgctgctcggcgagcggtgg
ccggacgtcccgcggatcgcgctcacggcgacggccacgcgggcgacgcaccaggagatc
acccagcggctgaacatgccgcgggcccgccacttcgtggccagcttcgaccggcccaac
atccagtaccggatcgtgccgaaggccgaccccaagaagcagctgctggcgttcctgcgc
gaggagcacgcgggcgacgcgggcatcgtctactgcctctcgcggaactcggtggagaag
acggccgagttcctgacccgcaacggcatcgaggcggtgccgtaccacgcgggtctggac
gcggccacccgtgcggcgcaccagtcgcggttcctgcgcgaggagggcctggtggtggtc
gcgacgatcgccttcgggatgggtatcgacaagccggacgtgcggttcgtcgcccacctg
gacctgccgaagtcggtcgagggctactaccaggagacgggccgtgcgggccgcgacgga
ttgccgtccacggcctggatggcgtacgggctcaacgacgtcatacagcagcgcaagctc
atccagtccggggagggcgacgaggcgttccgccgccgggcccaggcgcacctggacgcg
atgctggcactgtgcgagaccgcccagtgccgccgcggccagctgctcgcctacttcggc
caggacccccggccgggcggttgcggcaactgcgacacctgcctggagccgccggacacc
tgggacgggacgatcgcggcgcagaaggtgctgtccacggtgtggcggctgcaccgggag
cggcggcagaagttcggcgcggtgcagatcgtcgacatcctgctgggacggcgcacggcc
aaggtcatccagttcgaccacgaccagctgtccgtgttcggcatcggcgaggagctgacc
gaaggcgaatggcgcggcgtcatccggcagttgctggcgcaggggctgctcgccgtcgag
ggcgagtacgggacgctggtgctgacggaggccagtggggcggtactgcggcgggagcgc
gaggtgccgttgcgcaaggagccgaagaagccggcggcggctccccggtcgtcgtcgccc
tccgcccggtccgaccgcaagccgaaggcggccgccgccgagctgcccccggagcttgcc
cccgcgttcgaggcgctgcgtgcctggcgcgccgaacaggcgcgggagcagggcgtcccg
gcgtacgtcatcttccacgacgccacgctgcgcgagatcgccaccgcctggcccacgtcg
gtgacccagctcggcggtatcagcggaatcggcgagaagaagctggccacctacggggag
ggcgtggtcggcgtgctcgcctcgctgggtggcccgccgaccgcccagcgggccgcggcg
ccgtccggcgggacggagccggacgactggcccgagccggacgacgagccggagcccgac
gactggatatga
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