Streptomyces cynarae: N8I84_23795
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Entry
N8I84_23795 CDS
T09435
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
scyn
Streptomyces cynarae
Pathway
scyn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scyn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
N8I84_23795 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scyn03021
]
N8I84_23795 (rpoB)
03400 DNA repair and recombination proteins [BR:
scyn03400
]
N8I84_23795 (rpoB)
Enzymes [BR:
scyn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
N8I84_23795 (rpoB)
Transcription machinery [BR:
scyn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
N8I84_23795 (rpoB)
DNA repair and recombination proteins [BR:
scyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
N8I84_23795 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
UXY21376
UniProt:
A0ABY6E3W8
LinkDB
All DBs
Position
unmamed1:5179034..5182519
Genome browser
AA seq
1161 aa
AA seq
DB search
MAASRNASTANTNNGASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNDAWKARVEE
ALENGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKERDFTYAAP
LFVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFVINGTERVVVSQLVRSPGVYFDSTID
KTSDKDIFSAKIIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTTEQILEEF
GEYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVG
RYKVNKKLGADAPLDAGILTVEDIISTIKYLVKLHAGETETTGDSGDTIVVETDDIDHFG
NRRLRSVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTS
QLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNI
GLIGSLASYGRVNAFGFVETPYRKVIDGQVTDEVDYLTADEEDRFVIAQANAPLTSDLRF
EENRVLVRRRGGEVDYVSPEDVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQ
AVPLIKSESPLVGTGMEYRSAVDAGDVVKAEKAGVVQEVSADYITTANDDGTYITYRLAK
FARSNQGTSVNQKVIVNEGDRVIEGQVLADGPATQNGEMALGKNLLVAFMPWEGHNYEDA
IILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGA
EVIAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGETGKVIGVRVFD
REEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKILPIEDMPFLEDGTPVD
IILNPLGVPSRMNPGQVLEIHLGWLASQGWDVSGLADEWAQRLQAIGADQVEPRTNVATP
VFDGAREDELAGLLQHTLPNRDGDRMVLPSGKARLFDGRSGEPFPDPISVGYMYILKLHH
LVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDD
VTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVF
RAAEELGIDLSRREPSSVEEV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctcgcgcaacgcctcgaccgcgaatacgaacaacggcgccagcaccgccccg
ctgcgcatctcctttgcaaagatcaaggagcccctcgaggttccgaaccttctcgcgctg
caaaccgagagcttcgactggctgctcggcaacgacgcatggaaggctcgcgtcgaggag
gctctggagaacggtcaggacgtccccaccaagtccggcctcgaggagatcttcgaggag
atctccccgatcgaggacttctccgggtcgatgtcgctgacgttccgggaccaccgcttc
gagccgccgaagaactcgatcgacgagtgcaaggagcgcgacttcacctacgccgcgccc
ctcttcgtcacggccgagttcaccaacaacgagaccggtgagatcaagtcccagacggtc
ttcatgggcgacttcccgctcatgacgaacaagggcactttcgtcatcaacggcaccgag
cgtgttgtggtgtcgcagctggtccgttcccccggtgtctacttcgactccaccatcgac
aagacgtccgacaaggacatcttctccgccaagatcatcccgtcccggggtgcctggctg
gagatggagatcgacaagcgcgacatggtcggtgtccgcatcgaccgcaagcgcaagcag
tccgtcaccgtcctcctgaaggcgctcggctggaccaccgagcagatcctcgaggagttc
ggcgagtacgagtccatgcgcgccaccctggagaaggaccacacccagggccaggacgac
gcgctgctcgacatctaccgcaagctgcgcccgggcgagcccccgacgcgtgaggccgcg
cagacgctgctcgagaacctctacttcaaccccaagcgctacgacctcgccaaggtcggc
cgctacaaggtcaacaagaagctgggtgcggacgctccgctggacgcgggcatcctgacc
gtcgaggacatcatctcgacgatcaagtacctggtgaagctgcacgccggcgagaccgag
accaccggcgacagtggcgacacgatcgtcgtcgagaccgacgacatcgaccacttcggc
aaccgtcgtctgcgcagcgtcggcgagctcatccagaaccaggtccgcacgggtctggcg
cgtatggagcgcgtcgtccgcgagcgcatgacgactcaggacgtcgaggcgatcacgccg
cagaccctgatcaacatccggccggtcgtcgcctccatcaaggagttcttcggcaccagc
cagctctcgcagttcatggaccagaacaacccgctgtcgggtctcacccacaagcgccgt
ctgtcggctcttggtccgggtggtctctcccgtgagcgggccggcttcgaggtccgtgac
gtgcacccctcgcactacggccgcatgtgcccgatcgagacgcccgaaggcccgaacatc
ggtctgatcggctcgctcgcctcctacggccgtgtcaacgcgttcggtttcgtcgagacc
ccgtaccgcaaggtcatcgacggccaggtcaccgacgaggtcgactacctgaccgccgac
gaggaggaccgcttcgtcatcgcgcaggccaacgcgccgctgaccagcgacctccgcttc
gaggagaaccgcgtgctggtccgccgccgtggcggcgaggtcgactacgtcagccccgag
gacgtcgactacatggacgtctcgccgcgccagatggtgtcggtcgcgaccgccatgatc
cccttcctcgagcacgacgacgccaaccgtgccctcatgggcgcgaacatgatgcgtcag
gccgtgccgctgattaagtcggagtccccgctcgtcggcaccggcatggagtaccgctcc
gccgtcgacgccggcgacgtcgtcaaggccgagaaggccggtgtggtccaggaggtctcc
gcggactacatcaccacggccaacgacgacggcacgtacatcacgtaccggctggccaag
ttcgcccgctccaaccagggcacctcggtcaaccagaaggtcatcgtcaacgagggcgac
cgcgtcatcgagggccaggtcctcgccgacggcccggccacccagaacggcgagatggcg
ctcggcaagaacctgctggtcgccttcatgccctgggaaggccacaactacgaggacgcg
atcatcctcagccagcgtctggtccaggacgacgtcctctcctcgatccacatcgaggag
cacgaggtcgacgcccgtgacaccaagctcggccccgaggagatcacccgggacatcccg
aacgtctccgaggaggtcctcgccgacctcgacgagcgcggcatcatccgcatcggcgcc
gaggtcatcgcgggcgacatcctcgtcggcaaggtgaccccgaagggtgagaccgagctg
acccccgaggagcgcctgctgcgcgcgatcttcggtgagaaggcccgtgaggtccgtgac
acctcgctgaaggtgccgcacggcgagaccggcaaggtcatcggcgtgcgcgtcttcgac
cgcgaggagggcgacgagctgccgccgggcgtgaaccagctggttcgcgtctacgtcgcg
cagaagcgcaagatcaccgacggtgacaagctcgccggccgtcacggcaacaagggtgtc
atctccaagatcctgcccatcgaggacatgccgttcctcgaggacggaactccggtcgac
atcatcctcaacccgctgggtgtgccgtcccgaatgaacccgggacaggtcctggagatc
cacctcggctggctcgccagccagggctgggacgtctccggcctggcggacgagtgggcg
cagcgcctgcaggcgatcggcgccgaccaggtcgaaccgcgcaccaacgtcgccaccccg
gtgttcgacggtgcccgcgaggacgagctggccggtctgctgcagcacacgctgccgaac
cgcgacggcgaccgcatggtcctcccgtccggcaaggccaggctgttcgacggccgctcc
ggtgagccgttcccggacccgatctcggtcgggtacatgtacatcctgaagctgcaccac
ctggtcgacgacaagctgcacgcccgctcgaccggtccgtactcgatgatcacccagcag
ccgctgggtggtaaggcccagttcggtggccagcgcttcggcgagatggaggtgtgggcc
ctcgaggcctacggcgccgcgtacgccctccaggagctgctcaccatcaagtccgacgac
gtcaccggccgcgtgaaggtctacgaggccatcgtcaagggcgagaacatccccgagccc
ggcatccccgagtccttcaaggtgctcatcaaggagatgcagtcgctctgcctgaatgtg
gaggtgctgtccagcgacggtatgtccatcgagatgcgcgacaccgacgaggacgtcttc
cgcgctgcggaggagctcggcatcgacctgtcccggcgcgagccgagcagcgtcgaagag
gtctga
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integrated database retrieval system
