Streptomyces cynarae: N8I84_24250
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Entry
N8I84_24250 CDS
T09435
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
scyn
Streptomyces cynarae
Pathway
scyn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scyn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N8I84_24250 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scyn03019
]
N8I84_24250 (groL)
03110 Chaperones and folding catalysts [BR:
scyn03110
]
N8I84_24250 (groL)
03029 Mitochondrial biogenesis [BR:
scyn03029
]
N8I84_24250 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scyn04147
]
N8I84_24250 (groL)
Enzymes [BR:
scyn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
N8I84_24250 (groL)
Messenger RNA biogenesis [BR:
scyn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
N8I84_24250 (groL)
Chaperones and folding catalysts [BR:
scyn03110
]
Heat shock proteins
HSP60 / Chaperonin
N8I84_24250 (groL)
Mitochondrial biogenesis [BR:
scyn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
N8I84_24250 (groL)
Exosome [BR:
scyn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
N8I84_24250 (groL)
Exosomal proteins of other body fluids (saliva and urine)
N8I84_24250 (groL)
Exosomal proteins of breast cancer cells
N8I84_24250 (groL)
Exosomal proteins of colorectal cancer cells
N8I84_24250 (groL)
Exosomal proteins of bladder cancer cells
N8I84_24250 (groL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UXY21459
UniProt:
A0ABY6E466
LinkDB
All DBs
Position
unmamed1:5264819..5266444
Genome browser
AA seq
541 aa
AA seq
DB search
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
IEDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLRNVAAGASPAALKKGID
AAVKAVSDDLLATARPIDEKSDIAAVAALSAQDQQVGELIAEAMDKVGKDGVITVEESNT
FGLELDFTEGMAFDKGYLSPYFVTDQERMEAVLDDPYILINQGKISAIADLLPLLEKVIQ
AGSSKPLLIIAEDLEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLQDMAVLTGATV
VSEEVGLKLDQVGLDVLGSARRVTVTKDDTTIVDGAGKSEDVAGRVNQIKAEIETTDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALV
HASKVLADGLGKEGDEATGVAIVRRAVVEPLRWIAENAGLEGYVIASKVAELEKGNGYNA
ATGEYGDLIKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKKEEEEPAAAGHGHGHA
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgaagttcgacgaggacgcccgtcgcgccctcgagcgcggcgtcaac
aagctggccgacacggtcaaggtgaccatcggccccaagggccgcaacgtcgtcatcgac
aagaagttcggcgcccccaccatcaccaacgacggcgtcaccatcgcccgtgaggtggag
atcgaggacccgtacgagaacctcggcgcccagctggtcaaggaggtggcgaccaagacc
aacgacatcgcgggtgacggcaccaccaccgccaccgtgctcgcccaggcgctggtgcgc
gagggcctgcggaacgtcgccgcgggcgcctccccggccgccctgaagaagggcatcgac
gccgccgtcaaggccgtctccgacgacctgctggccaccgcgcgcccgatcgacgagaag
tccgacatcgccgccgtcgccgcgctgtccgcccaggaccagcaggtcggcgagctgatc
gccgaggcgatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggtctggagctggacttcaccgagggcatggccttcgacaagggctacctgtcgccg
tacttcgtgacggaccaggagcgcatggaggccgtcctcgacgacccgtacatcctgatc
aaccagggcaagatctccgccatcgcggatctgctgccgctgctggagaaggtcatccag
gccggctcctccaagccgctgctgatcatcgccgaggacctcgagggcgaggccctgtcc
accctggtcgtcaacaagatccgcggcaccttcaacgcggtcgccgtcaaggcccccggc
ttcggtgaccgccgcaaggcgatgctgcaggacatggcggtcctcaccggcgccacggtc
gtctccgaggaggtcggcctcaagctcgaccaggtcggcctggacgtgctgggctccgcc
cgccgcgtcaccgtcaccaaggacgacacgaccatcgtcgacggcgccggcaagtccgag
gacgtcgcgggccgcgtcaaccagatcaaggccgagatcgagaccacggactccgactgg
gaccgcgagaagctccaggagcgcctcgcgaagctggccggcggcgtgtgcgtgatcaag
gtcggcgccgccaccgaggtggagctgaaggagaagaagcaccgcctggaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggtggtggctccgccctggtc
cacgcctccaaggtgctggccgacggcctcggcaaggagggcgacgaggccaccggtgtc
gccatcgtgcgccgcgcggtcgtcgagccgctgcgctggatcgccgagaacgcgggcctg
gagggctacgtcatcgcctccaaggtcgccgagctggagaagggcaacggctacaacgcc
gccaccggcgagtacggcgacctgatcaaggccggcgtcatcgacccggtcaaggtcacc
cgctccgccctggagaacgccgcctccatcgcctccctgcttctgacgaccgagaccctg
gtcgtcgagaagaaggaagaggaggagcccgccgcggccggccacggccacggtcacgcc
cactga
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