KEGG   Streptomyces cynarae: N8I84_24250
Entry
N8I84_24250       CDS       T09435                                 
Symbol
groL
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
scyn  Streptomyces cynarae
Pathway
scyn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:scyn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    N8I84_24250 (groL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scyn03019]
    N8I84_24250 (groL)
   03110 Chaperones and folding catalysts [BR:scyn03110]
    N8I84_24250 (groL)
   03029 Mitochondrial biogenesis [BR:scyn03029]
    N8I84_24250 (groL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:scyn04147]
    N8I84_24250 (groL)
Enzymes [BR:scyn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     N8I84_24250 (groL)
Messenger RNA biogenesis [BR:scyn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     N8I84_24250 (groL)
Chaperones and folding catalysts [BR:scyn03110]
 Heat shock proteins
  HSP60 / Chaperonin
   N8I84_24250 (groL)
Mitochondrial biogenesis [BR:scyn03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    N8I84_24250 (groL)
Exosome [BR:scyn04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   N8I84_24250 (groL)
  Exosomal proteins of other body fluids (saliva and urine)
   N8I84_24250 (groL)
  Exosomal proteins of breast cancer cells
   N8I84_24250 (groL)
  Exosomal proteins of colorectal cancer cells
   N8I84_24250 (groL)
  Exosomal proteins of bladder cancer cells
   N8I84_24250 (groL)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: UXY21459
UniProt: A0ABY6E466
LinkDB
Position
unmamed1:5264819..5266444
AA seq 541 aa
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
IEDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLRNVAAGASPAALKKGID
AAVKAVSDDLLATARPIDEKSDIAAVAALSAQDQQVGELIAEAMDKVGKDGVITVEESNT
FGLELDFTEGMAFDKGYLSPYFVTDQERMEAVLDDPYILINQGKISAIADLLPLLEKVIQ
AGSSKPLLIIAEDLEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLQDMAVLTGATV
VSEEVGLKLDQVGLDVLGSARRVTVTKDDTTIVDGAGKSEDVAGRVNQIKAEIETTDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALV
HASKVLADGLGKEGDEATGVAIVRRAVVEPLRWIAENAGLEGYVIASKVAELEKGNGYNA
ATGEYGDLIKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKKEEEEPAAAGHGHGHA
H
NT seq 1626 nt   +upstreamnt  +downstreamnt
atggcgaagatcctgaagttcgacgaggacgcccgtcgcgccctcgagcgcggcgtcaac
aagctggccgacacggtcaaggtgaccatcggccccaagggccgcaacgtcgtcatcgac
aagaagttcggcgcccccaccatcaccaacgacggcgtcaccatcgcccgtgaggtggag
atcgaggacccgtacgagaacctcggcgcccagctggtcaaggaggtggcgaccaagacc
aacgacatcgcgggtgacggcaccaccaccgccaccgtgctcgcccaggcgctggtgcgc
gagggcctgcggaacgtcgccgcgggcgcctccccggccgccctgaagaagggcatcgac
gccgccgtcaaggccgtctccgacgacctgctggccaccgcgcgcccgatcgacgagaag
tccgacatcgccgccgtcgccgcgctgtccgcccaggaccagcaggtcggcgagctgatc
gccgaggcgatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggtctggagctggacttcaccgagggcatggccttcgacaagggctacctgtcgccg
tacttcgtgacggaccaggagcgcatggaggccgtcctcgacgacccgtacatcctgatc
aaccagggcaagatctccgccatcgcggatctgctgccgctgctggagaaggtcatccag
gccggctcctccaagccgctgctgatcatcgccgaggacctcgagggcgaggccctgtcc
accctggtcgtcaacaagatccgcggcaccttcaacgcggtcgccgtcaaggcccccggc
ttcggtgaccgccgcaaggcgatgctgcaggacatggcggtcctcaccggcgccacggtc
gtctccgaggaggtcggcctcaagctcgaccaggtcggcctggacgtgctgggctccgcc
cgccgcgtcaccgtcaccaaggacgacacgaccatcgtcgacggcgccggcaagtccgag
gacgtcgcgggccgcgtcaaccagatcaaggccgagatcgagaccacggactccgactgg
gaccgcgagaagctccaggagcgcctcgcgaagctggccggcggcgtgtgcgtgatcaag
gtcggcgccgccaccgaggtggagctgaaggagaagaagcaccgcctggaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggtggtggctccgccctggtc
cacgcctccaaggtgctggccgacggcctcggcaaggagggcgacgaggccaccggtgtc
gccatcgtgcgccgcgcggtcgtcgagccgctgcgctggatcgccgagaacgcgggcctg
gagggctacgtcatcgcctccaaggtcgccgagctggagaagggcaacggctacaacgcc
gccaccggcgagtacggcgacctgatcaaggccggcgtcatcgacccggtcaaggtcacc
cgctccgccctggagaacgccgcctccatcgcctccctgcttctgacgaccgagaccctg
gtcgtcgagaagaaggaagaggaggagcccgccgcggccggccacggccacggtcacgcc
cactga

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