Streptomyces cynarae: N8I84_29190
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Entry
N8I84_29190 CDS
T09435
Name
(GenBank) HAMP domain-containing protein
Organism
scyn
Streptomyces cynarae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
GAF
DUF4795
Med21
OKR_DC_1_N
RNase_Y_N
bHLH-MYC_N
Motif
Other DBs
NCBI-ProteinID:
UXY22315
LinkDB
All DBs
Position
unmamed1:6408589..6414048
Genome browser
AA seq
1819 aa
AA seq
DB search
MESGAATRGTKTRAKGGQSLGNQRAGRGGTTAVDTAALNRLLAALVSMRDGNFRKRLTVS
GDGVMSEIAAVFNEVADRNLHLTGELARVRRVVGREGKLTERLETGACEGSWASAIEASN
ALVDDLVRPVSEVSRVLSAVAEGDLSPRMELRAPGPEGTGHPLRGEFLKVSRTVNNLVDQ
LSTFTDEVTRVAIEVGTEGKLGGQARLRGMSGSWKDLTESVNTMAYRLTAQVRDIALVTT
AVAKGDLSRKVTVHVAGEMLELKNTVNTMVEQLSAFSSEVTRVAREVGTEGILGGQAQVP
GVAGVWKDLTDSVNVMAGNLTAQVRGIAQVTTAVANGDLSQKVTVPARGEVARLAETINQ
MTETLRIFADEVTRVANEVGAEGQLGGQANVPGAAGTWKDLTDSVNTVFRNLTTQVRDIA
AVTTAVANGDMSQKVTVDVAGEMLELKNTVNGMVDQLSAFGAEVTRVAREIGVEGELGGQ
AQVPGAAGTWKDLTDSVNTAFRNLTGQVRNIAQVTTAVANGDLSQKVTVDVSGEMLQLKN
TVNTMVDQLSSFADQVTRMARDVGTEGRLGGQARVDGVSGTWKELTDSVNSMASNLTGQV
RNIAQVTTAVARGDLSQKIDVDARGEILELKNTINTMVDQLSAFAEQVTRVAREVGTEGR
LGGQAQVPGVAGVWRDLTDSVNGMAGNLTAQVRNIAQVATAVARGDLSQKITVDARGEIL
ELKNTLNTMVDQLSSFAQEVTRVAREVGTEGILGGQAEVQGVSGTWKDLTQSVNGMANNL
TMQVRNIAEVTTAVAKGDLSKKITVDAKGEILELVTTVNTMVDQLSSFAEQVTRVAREVG
TEGILGGQAHVPGVTGIWKDLSDNVNLMANNLTMQVRNISQVAAAVANGDLTRTVTIEAR
GEVAQLADTFNTMVKTLSSFADQVTKVAREVGTDGILGGQAYVPGVAGTWKDLTESVNQM
ASNLTGQVRNIAMVTTAIAKGDLTKKIDIDARGEILELKTTINTMVDQLSSFAEEVTRVA
REVGTEGQLGGQARVRDVDGTWRDLTESVNEMAGNLTRQVRAIARVATAVTRGDLNLKID
VDASGEIQELQDYINKMIANLRDTTIANKEQDWLKGNLARISALMQGRRDLEDVASLIMS
ELTPVVSAQHGAFFVAMPLVDGQDVSAENDDQYELRMLGSYGYSMGSMPTSFRPGEALIG
TAAMEKRTILVENAPSGYLKISSGLGEAPPAQVVVIPVLFEGKVLGVIELASFTPFTQIQ
KDFLNQIAEMIATSVNTISVNTKTEVLLKQSQELTEQLRLRSEELEQRQKALQASNAELE
EKAELLAQQNRDIEVKNTEIEEARQVLEERAEQLAVSMRYKSEFLANMSHELRTPLNSLL
ILAKLLADNAEGNLSPKQVEFAETIHGAGSDLLQLINDILDLSKVEAGKMDVSPTRIALV
QLVDYVEATFRPLTAEKGLDFSVRVSPELPATLHTDEQRLLQVLRNLLSNAVKFTDTGAV
ELVIRPAGGDVPMAIREQLLEAGSLRDADAELIAFSVADTGIGIPASKMRVIFEAFKQAD
GTTSRKYGGTGLGLSISREIARLLGGEIHAQSEPGRGSTFTLYLPLHPSELPPHGYSQLA
PTLEAGELLASEAELSAPDIETPAEVKSYQETQNGPAALFRRRRRAVTAGRGGVGQDQVG
GEPQGGVLPRQGVRFDGEKVLIVDDDIRNVFALTSVLEQHGLSVLYAENGREGIEVLEQH
DDVAVVLMDIMMPEMDGYATTTAIRRMPQFAGLPIIALTAKAMKGDREKAIESGASDYVT
KPVDPDHLLSVMEQWMRAE
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
gtggagtctggcgcagcgacgcgtggcacgaagacgcgcgcgaaaggcggacagtccctg
ggcaaccagcgcgcggggcgcggcggaaccaccgcggtggacacggcggccctgaaccgg
ctgctggcggccctggtgtcgatgagggacggcaacttccgtaagaggctgaccgtctcc
ggtgacggggtcatgtccgagatcgccgccgtcttcaacgaggtggccgaccggaacctg
catctgaccggtgagctggcgcgggtgcggcgtgtggtcggccgtgagggcaaactcacc
gagcggctggagacgggtgcctgtgagggttcctgggcgtcggcgatcgaggcgtccaac
gcgctcgtggacgatctcgtccggccggtctccgaggtcagccgcgtgctgtccgcggtg
gccgagggcgatctgtcgccgcgcatggagctgcgggcgccgggtccggaggggacgggg
catccgctgcgcggcgagttcctgaaggtctcccgtaccgtcaacaatctggtcgaccag
ctgtcgacgttcaccgacgaggtcacgcgggtcgcgatcgaggtgggcaccgagggcaag
ctgggcgggcaggcccggttgcgcggtatgtcgggttcgtggaaggacctgacggagtcg
gtcaacacgatggcgtaccggctgaccgcgcaggtgcgggacatcgcgctggtgacgacg
gcggtcgcgaagggtgatctgtcgcgcaaggtcacggtgcacgtcgccggcgagatgctg
gagctgaagaacaccgtcaacacgatggtggagcagctgtcggccttctcgtccgaggtg
acgcgggtggcccgcgaggtcggcacggagggcatcctgggcggccaggcacaggtgccg
ggcgtcgccggggtgtggaaggacctcaccgactcggtgaacgtgatggccggcaacctg
acggcccaggtgcgcgggatcgcgcaggtcaccacggcggtggccaacggtgacctgtcg
cagaaggtcaccgtgccggcgcgcggcgaggtcgcgcgcctcgccgagacgatcaaccag
atgaccgagacgctgcggatcttcgcggacgaggtcacgcgcgtggccaacgaggtgggt
gccgaggggcagctcggcggtcaggcgaacgtgccgggtgcggcgggaacgtggaaggac
ctcaccgattcggtgaacacggtcttccggaatctgaccacccaggtgcgggacatcgcc
gccgtgacgactgcggtggccaacggcgacatgtcgcagaaggtcacggtcgacgtggcc
ggcgagatgctcgagctgaagaacaccgtcaacggcatggtcgaccagctgtcggcgttc
ggtgccgaggtcacgcgcgtggcgcgggagatcggagtcgagggcgagctgggcggccag
gcgcaggtgccgggcgcggccggtacgtggaaggacctgacggactccgtcaacaccgct
ttccgcaacctcacgggtcaggtccgcaacatcgcgcaggtgacgacggcggtggccaac
ggcgacctgtcgcagaaggtcaccgtggacgtctccggcgagatgctccagctgaagaac
accgtgaacacgatggtggaccagctgtcgagcttcgcagaccaggtgacccgcatggcc
cgggacgtgggcacggagggccgcctgggcggccaggcccgcgtggacggcgtgtcgggc
acgtggaaggagctcaccgactccgtcaactcgatggcgtccaacctgaccggtcaggtg
cgcaacatcgcgcaggtgacgacggccgtggcgcgcggcgatctgtcccagaagatcgac
gtcgacgcgcgcggagagatcctcgagctcaagaacaccatcaacacgatggtcgaccag
ctctccgccttcgccgagcaggtgacgcgggtggcccgcgaggtgggtacggagggccgg
ctgggcggtcaggcgcaggtgccgggcgtggccggcgtgtggcgcgacctgacggactcc
gtgaacggcatggcgggcaacctcaccgcgcaggtgcgcaacatcgcgcaggtcgcgacc
gccgtggcgcgcggtgacctgtcccagaagatcaccgtggacgcgcgcggtgagatcctc
gagctgaagaacacgctgaacacgatggtggaccagctgtcgtcgttcgcccaggaggtc
acgcgcgtcgcccgtgaggtcggtacggagggcatcctgggcggtcaggccgaggtgcag
ggcgtctccggcacctggaaggacctgacgcagtccgtgaacggcatggcgaacaacctg
accatgcaggtgcgcaacatcgccgaggtcacgaccgcggtcgccaagggcgacctgtcc
aagaagatcaccgtcgacgccaagggcgagatcctcgaactggtcaccaccgtcaacacg
atggtggaccagctgtcgtcgttcgccgagcaggtgacgcgggtggcccgcgaggtgggc
accgagggcattctgggcggtcaggcgcacgtcccgggcgtcacgggcatctggaaggac
ctcagcgacaacgtcaacctcatggccaacaacctgaccatgcaggtgcggaacatctcc
caggtcgccgcggcggtcgccaacggtgacctgacgcggacggtgacgatcgaggcgcgc
ggcgaggtcgcgcagctcgccgacaccttcaacacgatggtgaagacgctgagttcgttc
gccgaccaggtcaccaaggtggcccgcgaggtgggcacggacggcatcctgggcggccag
gcctacgttccgggcgtggccggcacgtggaaggacctcaccgagtccgtgaaccagatg
gcgtcgaacctgaccggtcaggtgcgcaacatcgccatggtgaccacggccatcgccaag
ggcgacctgaccaagaagatcgacatcgacgcgcgcggtgagatcctggagctgaagacc
accatcaacacgatggtcgaccagctgtcctccttcgcggaggaggtcacgcgcgtggcc
cgcgaggtgggcacggaggggcagctcggcggccaggcacgcgtgcgggacgtcgacggc
acctggcgggacctgacggagtccgtgaacgagatggccgggaacctgacccggcaggtg
cgcgccatcgcgcgcgtggcgaccgcggtgacgcgcggcgacctcaacctgaagatcgac
gtggacgcctccggggagatccaggagcttcaggactacatcaacaagatgatcgccaac
ctgcgcgacaccacgatcgcgaacaaggagcaggactggctcaagggcaacctggcccgt
atctccgcgctgatgcagggccgccgtgacctggaggacgtggcctcgctgatcatgagc
gagctgacgccggtggtctccgcgcagcacggcgcgttcttcgtcgcgatgccgctggtc
gacggccaggacgtgagcgccgagaacgacgaccagtacgagctgcgcatgctgggctcc
tacggctactcgatgggctccatgccgacgtcgttccggccgggtgaggcgctgatcggg
acggcggccatggagaagcgcacgatcctggtggagaacgcccccagcggctatctgaag
atctcctccgggctcggggaggcgccgcccgcccaggtggtcgtcattccggtgctcttc
gagggcaaggtgctcggcgtcatcgagctggcgtccttcacgccgttcacgcagatccag
aaggacttcctgaaccagatcgccgagatgatcgcgaccagcgtcaacaccatctccgtc
aacaccaagacggaggtgctgctgaagcagtcgcaggagctgaccgagcaactgaggctg
cggtcggaggagttggagcagcggcagaaggccctccaggcgtccaacgccgaactggag
gagaaggccgagctgctcgcccagcagaaccgcgacatcgaggtcaagaacaccgagatc
gaggaggcgcggcaggtcctggaggagcgcgccgagcagctcgcggtgtccatgcgctac
aagagcgagttcctggccaacatgtcgcacgagctgcgcacgccgctcaactcgctgctg
atcctggccaagctgcttgccgacaacgccgagggcaacctctcgccgaagcaggtggag
ttcgccgagaccatccacggcgccggctcggacctgcttcagctgatcaacgacatcctg
gacctgtcgaaggtcgaggcgggcaagatggacgtctcgccgacgcgtatcgcgctcgtc
cagctcgtcgactacgtggaggccaccttccggccgctgaccgcggagaagggcctcgac
ttctcggtccgggtgtcgccggagctgccggccacgctgcacaccgacgagcagcggctg
ctgcaggtgctgcgcaacctgctgtccaacgcggtgaagttcaccgacaccggggccgtg
gaactcgtcatccggcctgcgggcggcgacgtcccgatggccatccgggagcagctcctg
gaggcgggctcgctgcgggacgcggacgcggagttgatcgcgttctcggtggccgacacc
ggcatcggcatcccggcgagcaagatgcgggtgatcttcgaggcgttcaagcaggccgac
ggcaccaccagccgcaagtacggcggtacggggctcgggctgtccatctcgagggagatc
gcccggctgctcggcggtgagatccacgcgcagagcgagcccggccgcggctcgacgttc
accctgtacctgccgctgcacccgagcgagctgccgccccacggctactcgcagctcgcg
cccaccctggaggccggtgagctgctggcctccgaggccgagctgtccgcgccggacatc
gagaccccggccgaggtgaagtcgtaccaggagacccagaacggtcccgccgcgctcttc
cggcgccgccgcagggccgtgaccgcgggccggggcggagtgggccaggaccaggtcggc
ggcgagcctcagggaggcgtgctgccgcggcagggcgtgcggttcgacggcgagaaggtg
ctgatcgtcgacgacgacatccgcaacgtcttcgcgctgaccagcgtccttgagcagcac
ggtctgtcggtgctgtacgccgagaacggccgtgagggcatcgaggtcctggaacagcac
gacgacgtcgcggtcgtcctgatggacatcatgatgccggagatggacgggtacgccacg
accaccgcgatccggcggatgccgcagttcgcggggctgccgatcatcgcgctgacggcg
aaggcgatgaagggcgaccgggagaaggccatcgagtcgggcgcatccgactatgtgacc
aagccggtcgatcccgatcatcttctttcggtgatggaacagtggatgcgcgcggagtga
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