Streptomyces cynarae: N8I84_29210
Help
Entry
N8I84_29210 CDS
T09435
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
scyn
Streptomyces cynarae
Brite
KEGG Orthology (KO) [BR:
scyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scyn03009
]
N8I84_29210 (rimO)
Enzymes [BR:
scyn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
N8I84_29210 (rimO)
Ribosome biogenesis [BR:
scyn03009
]
Prokaryotic type
ribosomal protein modification factors
N8I84_29210 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
UXY22319
LinkDB
All DBs
Position
unmamed1:6419124..6420602
Genome browser
AA seq
492 aa
AA seq
DB search
MPERRTVALVTLGCARNEVDSEELAGRLEADGWQLVEDAEDADVAVVNTCGFVEAAKKDS
VDALLEANDLKGHGRTRAVVAVGCMAERYGKELAEALPEADGVLGFDDYADISDRLQTIL
SGGIHASHTPRDRRKLLPISPAERQSAADVALPGHGAPTDLPEGVAPASGPRAPLRRRLD
GSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLNETRWLAEQGVKEIMLVSENNT
SYGKDLGDIRLLESLLPELAEVDGIERVRVSYLQPAEMRPGLIDVLTSTPKVAPYFDLSF
QHSAPGVLRAMRRFGDTDRFLDLLDTIRGKAPEAGVRSNFIVGFPGETEADLAELERFLN
GARLDAIGVFGYSDEEGTEAATYDNKLDEDVVAERLAHISRLAEELVSQRAEERVGETVH
VLVESVGEDDEVAAYGRAAHQAPETDGQVLFTRGEGLSVGRMVEAKVVGTEGVDLVAEPL
AGALGCPEEAGR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacgccgtaccgtcgcactcgtcacccttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgtttggaggcggacggctggcagctcgtggaggacgccgag
gacgcggacgtcgcagtggtgaacacatgcggcttcgtcgaggccgccaagaaggactcc
gtggacgccctcctggaggcgaacgacctcaaggggcacggcagaacccgggccgtggtg
gcggtcggctgcatggccgagcggtacggcaaggagctggccgaggccctcccggaggcc
gacggcgtgctcggcttcgacgactacgcggacatctccgaccggctccagaccatcctg
tccggcggcatccacgcctcccacaccccgcgcgaccgccgcaagctcctgccgatcagc
cccgcggagcggcagtcggcggccgacgtggccctgcccgggcacggtgccccgacggac
ctcccggagggcgtcgccccggcctcgggcccccgggcgccgctgcgccgccggctcgac
ggctcgcccgtcgcctcggtcaagctcgcctccggttgtgaccggcgctgctccttctgc
gccatcccctccttccggggctccttcatctcccgccgcccgagcgacgtgctgaacgag
acccgctggctggccgaacagggcgtgaaggagatcatgctggtctccgagaacaacacc
tcctacggcaaggacctgggcgacatccgcctcctggagtccctgctgccggagctggcc
gaggtggacggcatcgagcgggtccgcgtcagctacctccagcccgccgagatgcgcccg
ggcctcatcgacgtgctcacctcgaccccgaaggtcgcgccctacttcgacctgtccttc
cagcactccgcgcccggcgtgctgcgcgccatgcggcgcttcggtgacaccgaccgcttc
ctggacctgctcgacacgatccgcggcaaggcacccgaggcgggcgtgcgctccaacttc
atcgtcggcttccccggcgagaccgaggccgacctggccgaactggagcgcttcctgaac
ggcgcccggctggacgcgatcggtgtcttcggctactccgacgaggagggcacggaggcc
gccacgtacgacaacaagctcgacgaggacgtcgtcgccgagcggctggcccacatctcc
cggctcgccgaggaactggtgtcccagcgcgccgaggagcgcgtcggcgagaccgtccac
gtgctggtggagtcggtgggcgaggacgacgaggtcgccgcgtacggccgagccgcccac
caggcgcccgagacggacggccaggtgctgttcacgaggggcgagggcctgagcgtcggt
cgtatggtcgaggcgaaggtggtcggtacggaaggtgtcgatctggtggccgagcccctc
gcgggggcgctcgggtgtcctgaggaggcgggcagatga
DBGET
integrated database retrieval system
