Streptomyces cynarae: N8I84_29455
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Entry
N8I84_29455 CDS
T09435
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
scyn
Streptomyces cynarae
Pathway
scyn00300
Lysine biosynthesis
scyn00470
D-Amino acid metabolism
scyn01100
Metabolic pathways
scyn01110
Biosynthesis of secondary metabolites
scyn01120
Microbial metabolism in diverse environments
scyn01230
Biosynthesis of amino acids
Module
scyn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
scyn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
N8I84_29455 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
N8I84_29455 (dapF)
Enzymes [BR:
scyn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
N8I84_29455 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
UXY22362
UniProt:
A0ABY6E6Q5
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All DBs
Position
unmamed1:6472436..6473305
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AA seq
289 aa
AA seq
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MSTRIAFLKGHGTENDFVIIPDPENAIDLPPAAVAALCDRRAGIGGDGLLHVVRSAAHPE
AEEMAGEAEWFMDYRNGDGSVAEMCGNGVRVFARYLQHAGHVTEGDLAIATRGGVKTVHL
AKDGDVTVGMGRAVLPAGDVTVSVGEHSWPARNVNMGNPHAVAFVDDLAHAGNLFTPPPF
SPASAYPDGVNVEFVVDRAPRHVAMRVHERGSGETRSCGTGACAVAVATARRDGADPAVT
GTPVTYTVDVPGGTLVITERPDGEIEMTGPAVIVAEGEIDAEWLLTAAR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcggatcgccttcctcaagggtcacggcacggagaacgacttcgtgatcatc
ccggaccccgagaacgccatcgacctgcccccggccgccgtcgccgccctgtgcgaccgc
cgcgcgggcatcggcggcgacggtctgctgcacgtcgtgcgctccgccgcgcaccccgag
gccgaggagatggccggggaggcggagtggttcatggactaccgcaacggcgacggctcg
gtcgcggagatgtgcggcaacggcgtacgggtgttcgcgcgctacctccagcacgccggt
cacgtgaccgagggcgatctcgcgatcgcaacgcgcgggggtgtcaagaccgtccacctc
gcgaaggacggcgatgtcaccgtcggcatgggccgggccgtcctgcccgcgggggacgtc
acggtcagtgtcggcgagcacagctggcccgcgcgcaacgtgaacatgggcaacccgcac
gcggtcgcgttcgtagacgacctcgcgcacgcggggaacctgttcaccccgcccccgttc
agcccggcctccgcctacccggacggggtgaacgtcgagttcgtggtcgaccgcgcccct
cgccacgtcgcgatgcgcgtccacgagcgcggctccggggagacccgctcgtgcggcacg
ggcgcgtgcgcggtggccgtggccacggcccgccgcgacggcgccgacccggccgtgacg
ggcacccccgtgacgtacaccgtggacgttccgggcggcaccctggtgatcaccgagcgc
ccggacggcgagatcgagatgaccggcccggcggtgatcgtcgccgagggcgagatcgac
gccgagtggctcctgaccgcggcccgctga
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