KEGG   Streptomyces cynarae: N8I84_32485
Entry
N8I84_32485       CDS       T09435                                 
Name
(GenBank) RNA polymerase sigma factor SigF
  KO
K03090  RNA polymerase sigma-B factor
Organism
scyn  Streptomyces cynarae
Brite
KEGG Orthology (KO) [BR:scyn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scyn03021]
    N8I84_32485
Transcription machinery [BR:scyn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     N8I84_32485
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 HTH_Crp_2 HTH_24 HTH_23 NirdL-like_HTH GerE HTH_28 MarR DUF7343 HTH_10 HTH_Tnp_ISL3 UPF0122 MarR_2 KORA HTH_3 Sigma70_ECF DUF4423 DUF134 YdaS_toxin
Other DBs
NCBI-ProteinID: UXY22899
LinkDB
Position
unmamed1:7155485..7156279
AA seq 264 aa
MQNRASVKHHPHDDAPDTTEAFRRLASLPPGPQRDALRDEIVEAWLPMAERLAGRFRSRG
ESFEDLRQVAFLGLVKAVDRYDPERGHAFESYAVPTVTGEIKRHFRDHMWTLHVPRRVQD
LRNRVRFAVQDLSQTVSGRRPTVAEIAEHANMSEEDVLAGLEALESFTALSLDAELPGSE
DGYSLGDSLGSPDPALDTVVDREAVKPRLKALPERERAILYMRFFDDMTQSSIAEQLGIS
QMHVSRLISRCCSRLREQVMRDAV
NT seq 795 nt   +upstreamnt  +downstreamnt
atgcagaaccgagctagcgtgaagcaccacccccacgacgacgcccccgacaccacggag
gccttccgcaggctcgcttcgctccccccgggcccccagcgcgacgcgctccgcgacgag
atcgtcgaggcctggctgcccatggccgaacggctcgcgggccgcttccgcagccgcggg
gagagcttcgaggacctgcgccaggtggcgttcctcggcctggtcaaggccgttgaccgg
tacgaccccgagcgggggcacgccttcgagagctatgccgtccccaccgtcaccggtgag
atcaagcggcacttccgcgaccacatgtggaccctgcacgtgccccgccgcgtccaggac
ctgcgcaaccgcgtccgcttcgccgtccaggacctgtcgcagaccgtctcgggccgcagg
cccaccgtcgccgagatcgccgagcacgccaacatgagtgaggaggacgtcctggccggc
ctcgaggccctggagagcttcacggcgctctccctggacgccgaactgcccggcagcgag
gacgggtactcgctgggcgactcgctcggctcgcccgaccccgcgctcgacaccgtcgtg
gaccgcgaggccgtcaagccccgtctcaaggccctcccggagcgcgaacgcgccatcctg
tacatgcgcttcttcgacgacatgacccagagcagcatcgccgagcagctcggcatctcc
cagatgcacgtctcccgcctgatcagccgctgctgctcccggctgcgcgagcaggtgatg
cgggacgccgtctaa

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