Shewanella cyperi: JYB88_00055
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Entry
JYB88_00055 CDS
T07829
Symbol
glyS
Name
(GenBank) glycine--tRNA ligase subunit beta
KO
K01879
glycyl-tRNA synthetase beta chain [EC:
6.1.1.14
]
Organism
scyp
Shewanella cyperi
Pathway
scyp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JYB88_00055 (glyS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scyp01007
]
JYB88_00055 (glyS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scyp03016
]
JYB88_00055 (glyS)
Enzymes [BR:
scyp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
JYB88_00055 (glyS)
Amino acid related enzymes [BR:
scyp01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
JYB88_00055 (glyS)
Transfer RNA biogenesis [BR:
scyp03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
JYB88_00055 (glyS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
DALR_1
Motif
Other DBs
NCBI-ProteinID:
QSX30119
UniProt:
A0A974XKR2
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All DBs
Position
complement(13396..15465)
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AA seq
689 aa
AA seq
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MNFENLLIEIGTEELPPKALRNLAESFAANFTDELAKAELSHGAVEWYAAPRRLALSVKQ
LATAQQDKVVEKRGPAVASAFDADGKPTKAAEGWARGNGISVDQAERLKTDKGEWLVHNA
KVEGVATETLIAAMTQKALDKLPIPKPMRWGAGSTQFIRPVHTVTLLLGSELVAGEVLGI
NSDRIIRGHRFMGEASFSLDHADNYLSALKERGKVIADYQERKALIKRDAEKAAAVIGGN
ADIEEALLEEVTSLVEWPVVLTASFEEKFLAVPAEALVYTMKGDQKYFPVFSDDGKLLPN
FIFVANIESKDPAQIIAGNEKVVRPRLADAEFFFNTDKKHSLESRLPSLETVVFQQQLGT
LKARVERISTLAGFIAEHMGANSFDAARAGLLSKTDLMTNMVMEFTDTQGTMGMHYARLD
GETEAVALALEEQYKPKFSGDTVPVAPVSCAVALAEKLDTLSGIFGIGQAPKGAADPFAL
RRAAIGVLRIIVENKLPLDLVDLIAKAVELHGSNLSNANAADEVLEFLMARFRAWYQDKG
ISTDVILAVLARRPTRPADFDDRILAVAHFRTLEQATALAAANKRVSNILAKVDGELPSK
VDNALLQESAEQQLAAKLAETAPVIAPLFAAGNYQQALTELAALRDSVDNFFEDVMVMAD
DQALRNNRLALLTQLRDQFLHVADISLLQ
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgaaaacttactcatagaaatcggcaccgaagagctgccgccgaaggccctg
cgcaacctggccgaatcctttgccgccaactttaccgacgagctggccaaggccgaactg
agccatggcgccgttgaatggtatgcggcccctcgccgcctggcactgtcggtcaagcaa
cttgccacggcccagcaggataaagtggtcgagaaacgcggcccggccgtggcttccgcc
ttcgatgccgatggcaagcccaccaaggctgccgagggctgggcccgcggtaacggtatc
agcgtcgaccaggccgagcgcctcaagaccgataagggcgagtggctggtccataacgcc
aaggtcgaaggtgtggccaccgagaccctgatagccgccatgacccagaaagccctggat
aagctgccgatccccaagcccatgcgctggggcgcaggcagtacccagtttatccgcccc
gtgcacactgtcaccctgctgctcggcagtgaactggttgccggcgaagtgctgggcatc
aactcagaccgcatcatccgcggccatcgctttatgggcgaagccagcttcagcctggat
cacgccgacaattacctgagcgccctgaaggagcgcggcaaggtcattgccgactatcag
gagcgtaaggcactgatcaagcgcgatgccgaaaaggccgccgcggttatcggtggcaac
gccgacatcgaagaagccctgctggaggaagtgacctcgctggtggaatggccagtggtg
ctgaccgccagcttcgaagagaagttcctggcagtaccggccgaagccctggtgtacacc
atgaagggtgaccagaagtatttccctgtgttctctgatgacggcaagctgctgcccaac
tttattttcgtcgccaacatagaatccaaggatccggctcaaatcatcgccggtaacgag
aaggtggtacgtccgcgcttggccgatgccgaattcttcttcaataccgacaagaagcac
agcctggaaagccgtctgccaagcctggagactgtggtattccaacagcaactcggcacc
ctcaaggcgcgggttgagcgcatctccacccttgccggttttattgccgagcacatgggt
gccaacagtttcgacgccgcccgtgccggtctgctgtccaagacagatctgatgaccaac
atggtgatggagtttaccgatacccagggcaccatgggcatgcactacgcccgcctggac
ggtgaaaccgaggccgtggctctggcgttggaagaacaatacaaacccaagttcagcggt
gatactgtgcccgtagcacccgtatcctgcgccgtggccctggccgagaagctggatacc
cttagcggtatcttcggcataggtcaggcccccaagggcgccgccgacccatttgccctg
cgccgtgctgccatcggcgttttgcgcatcatagtggaaaacaagctccctctggatctg
gttgatttgattgccaaagcagttgaattgcacggcagcaatctcagcaatgccaatgcc
gccgacgaggtgttggagttcctgatggcccgcttccgcgcctggtaccaggacaagggc
atcagcacagatgtgatcctcgcggtactggcccgccgtccaacccgcccagcggatttt
gatgaccgtatcctggccgtggcccatttccgcaccctggaacaggcgaccgccctggct
gccgccaacaagcgggtgtccaatattctggccaaggtagacggcgaactgccatccaag
gttgataacgccctgttgcaagagtctgccgagcaacaactggcggcaaaactggccgaa
accgcgccggtaattgccccgttgtttgcagccggtaactaccagcaggccctgaccgaa
ctggccgccctgcgcgacagcgtcgacaacttcttcgaagatgtgatggtgatggccgat
gatcaggccctgcgcaacaaccgtctggcactgctgacgcaattgcgcgatcagttcctg
cacgtggccgacatctccctgctgcaataa
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