KEGG   Shewanella cyperi: JYB88_00085
Entry
JYB88_00085       CDS       T07829                                 
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
  KO
K01825  3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
Organism
scyp  Shewanella cyperi
Pathway
scyp00071  Fatty acid degradation
scyp00280  Valine, leucine and isoleucine degradation
scyp00310  Lysine degradation
scyp00362  Benzoate degradation
scyp00380  Tryptophan metabolism
scyp00410  beta-Alanine metabolism
scyp00640  Propanoate metabolism
scyp00650  Butanoate metabolism
scyp00907  Pinene, camphor and geraniol degradation
scyp00930  Caprolactam degradation
scyp01100  Metabolic pathways
scyp01110  Biosynthesis of secondary metabolites
scyp01120  Microbial metabolism in diverse environments
scyp01200  Carbon metabolism
scyp01212  Fatty acid metabolism
Module
scyp_M00087  beta-Oxidation
Brite
KEGG Orthology (KO) [BR:scyp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00640 Propanoate metabolism
    JYB88_00085 (fadB)
   00650 Butanoate metabolism
    JYB88_00085 (fadB)
  09103 Lipid metabolism
   00071 Fatty acid degradation
    JYB88_00085 (fadB)
  09105 Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    JYB88_00085 (fadB)
   00310 Lysine degradation
    JYB88_00085 (fadB)
   00380 Tryptophan metabolism
    JYB88_00085 (fadB)
  09106 Metabolism of other amino acids
   00410 beta-Alanine metabolism
    JYB88_00085 (fadB)
  09109 Metabolism of terpenoids and polyketides
   00907 Pinene, camphor and geraniol degradation
    JYB88_00085 (fadB)
  09111 Xenobiotics biodegradation and metabolism
   00362 Benzoate degradation
    JYB88_00085 (fadB)
   00930 Caprolactam degradation
    JYB88_00085 (fadB)
Enzymes [BR:scyp01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     JYB88_00085 (fadB)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     JYB88_00085 (fadB)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     JYB88_00085 (fadB)
  5.3  Intramolecular oxidoreductases
   5.3.3  Transposing C=C bonds
    5.3.3.8  Delta3-Delta2-enoyl-CoA isomerase
     JYB88_00085 (fadB)
SSDB
Motif
Pfam: 3HCDH_N ECH_1 3HCDH ECH_2 NAD_binding_2 DUF3048
Other DBs
NCBI-ProteinID: QSX30125
UniProt: A0A974XKI4
LinkDB
Position
complement(22784..24925)
AA seq 713 aa
MIYQSPTIEVELTDDKIARLCFNSSGSVNKFDRETLASLDAALDSVKAADAKALLLTTGK
DAFIVGADITEFQGLFAEDEATLLTWLEQANQVFNKLEDMPFPTASAVKGFALGGGCEAI
LATDFRIADSSARIGLPETKLGLIPGFGGTVRLPRLIGADNAMEWITTGKDQRPEDALKV
GAVDAVTAPEQLEAAAIAMLKDAIAGKLDWQARRARKQAPLTLPKLEAMMSFTTAKGMVF
AVAGKHYPAPMAAVNLIEQVAGQGRAEALKAEHQAFIKLAKTEVATALIGIFLNDQLVKG
KAKKAGKQAKAINQAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQGALDLGLNEAAKLLT
AQVERGRLTADKMAKVLNNITPALEYAPIKHADIVVEAVVENPKVKAMVLAEVESQLGDE
AIIASNTSTISINHLAKSLKHPERFCGMHFFNPVHKMPLVEVIRGEHSSDETIASVVAYA
SKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLADGADFAAIDKVMEMQFGWPMGPAYLL
DVVGLDTGHHAQAVMAEGFPDRMGKNGKDAIDVMYEAQRLGQKNGKGFYQYSVDKRGKPK
KEQDVVAYELLQAAFGEQKSFEADEIIARTMIPMIIETVRCLEEGIIASPAEGDMGLVYG
LGFPPFRGGVFRYLDTMGLANFVALADKYAHLGGLYQVTDAMRDLAANNGSYY
NT seq 2142 nt   +upstreamnt  +downstreamnt
atgatctaccaaagccctaccattgaggtcgaactgaccgatgacaagattgcccggctg
tgtttcaactccagcggctcggtcaacaagttcgatcgcgaaaccctggcgtccctggat
gccgcgctggacagtgtcaaagccgccgatgccaaggcgctgctgctgaccacaggcaaa
gatgcctttattgtcggcgccgacattaccgaattccaaggcttgtttgccgaagacgag
gccaccctgttgacctggctggaacaggccaaccaggtattcaacaagctcgaagacatg
ccctttcctaccgcctctgccgtgaagggctttgccctgggtggtggctgtgaagccata
ctggcaaccgatttccgtatcgccgacagcagtgccaggattggtctgccggaaaccaag
ctgggcctgatcccaggcttcggcggcacagtccgcctgccacgcctgataggcgcggac
aatgccatggagtggatcaccacaggcaaagatcaacgtcccgaagatgccctcaaggtc
ggtgccgttgatgcagtgactgctccagagcagctggaagccgcagccattgccatgctc
aaggatgccatcgccggcaaactggactggcaggcccgccgtgcccgtaagcaagccccc
ctgaccctgcccaaactggaagccatgatgtctttcaccacggccaagggcatggtgttc
gcggtggcaggcaagcattaccccgcccccatggcggcagtcaatctgatagagcaagtg
gccggccaaggccgtgccgaagcactcaaggccgaacaccaggcctttatcaagctggcc
aagacagaggtggctaccgcccttatcggtattttcctcaatgaccaattggtcaagggc
aaggccaagaaggccggcaagcaggccaaagccatcaatcaggccgccgtactcggcgcc
ggtatcatgggtggcggcattgcataccagagcgccagcaagggcactcccatagtcatg
aaagacattgcccagggcgcattggatctggggctcaatgaagcggccaagttgctgacc
gcccaggttgaacgtggtcgtctgaccgctgacaagatggccaaggtgctgaacaacatc
accccggccctggaatacgcccccatcaaacacgccgacattgtggtcgaagccgtagtg
gaaaaccccaaggtcaaggccatggtactggccgaagtggagtcccagttgggcgatgag
gccatcattgcctccaatacttctaccatctccatcaatcatctggccaagagtctcaag
catcccgagcgcttctgcggcatgcacttctttaacccggtacacaagatgccgctggtg
gaagtcattcgcggtgagcacagcagcgacgaaaccatagcctctgtggtggcctacgcc
agcaagatgggtaagaccccgattgtggtgaacgactgccccggcttcttcgtcaaccgg
gtattgttcccctactttgccggcttcagcggcctgctggccgacggtgccgacttcgcc
gccatcgacaaggtgatggagatgcaatttggctggccaatgggccctgcctatctgctg
gacgtggttggactcgataccggccaccatgcccaggccgtgatggccgaaggcttcccc
gaccgtatgggcaagaatggcaaagatgccatagatgttatgtacgaggcccaacgtctg
ggacaaaagaacggcaagggtttctatcagtacagcgtcgacaagcgcggcaagcccaag
aaggaacaggacgttgtcgcctatgagctgctgcaggccgccttcggtgagcagaagtcc
tttgaagccgacgagatcattgcccgcaccatgatccccatgatcattgaaaccgtgcgt
tgtctggaagaaggtatcatcgcttctccggccgaaggcgatatgggcctggtgtacggt
ttgggcttcccaccgttccgtggcggcgtcttccgttacctggataccatgggcctggct
aacttcgtcgccctggcagacaagtatgcccacctgggcggtctgtatcaggtcaccgat
gccatgcgcgacctcgccgccaacaacggcagctactactag

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