Shewanella cyperi: JYB88_01455
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Entry
JYB88_01455 CDS
T07829
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyp02000
]
JYB88_01455
Transporters [BR:
scyp02000
]
Other transporters
Pores ion channels [TC:
1
]
JYB88_01455
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
QSX30360
UniProt:
A0A975AKP1
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All DBs
Position
320800..323727
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AA seq
975 aa
AA seq
DB search
MFKLKPSVLTLALAAAGLPGAMLHSAAFAAEPQQTEPQQTSDSTEQEAANQTKINQEDLE
HIEVTGYRRSLIDSLNAKRFGDTVSEQLSADDLGALPDVSMADALTRLPGISAVRTGGQA
AEINIRGMSGGFVFSTLNGREQVSTSGSRSIEFDQYPSELISSAAVYKSPKASLIEGGLA
GTVELATASPLTADKEQNVTLNVRGMYNDRASEVYGAEEFGHRLSFSYQGKFLDETLGVA
LGYARLEQPSVATQFIGLAYNDSKDVDGLANDTNGPDGGLNKEYISEGFELQHLGGLEVR
NGYMGAIEWAPVSNFKLKADAFLSRFDSEAFARGFRVKLGGPNVAVANPVLDGNAVIGGT
FNRTSSSYTRVELVNDDNQDFDQVNSFGVNADWQVTDRLNVAADVSYSSAKSDFRNGLLW
SNVAVDANADKPLFDENVSISYQLNGLDLPDLGFNQADAFSDINRVMVSKYGIYPYENED
EVKAYRLDFKYDLDSDWLASVEFGVRWSDRTYSNDRSVFEFGNDGGFSSTEPPLQLTEDM
VTVVDWSGDFSYFPSYLAIDLDQALNAWFPEGIPQPVQTWGNAIGVIDPMGYTTNYAWSV
QQSGEVYEKVLASYLMFNIDTEIGGLPLTGNIGLRRVDTDQSATLLQNVGGDPAQGAQYI
VDEVGIINKFYAPTVVGVTYTDYLPSLNLSLKLTDDSQLRFAAAKVMARPPINRLAGDAS
ATTNNDGIINGSSTNNPFLKPFYATQYDLSYEHYFEEGALVAALFYKNIDSFIDEFDIVG
FDFRANGFNVPDYIVSPSGEQIATTNGTYTTAVNNTEGGYIRGLELAYTQVFASLPSPFS
GLGLNASYSYSESEVQKFTDLGGNSVPQTLEGLSKHVANLTLFYGYEGFETRVSARYRSS
FVSEQVAVNSQVVNFDAETVLDYQASYQINDNLGVLFQVNNLTDEPTKSYFGTEAKTGTL
QYFGRQFFLGVTYAM
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagctcaaacccagtgtcctgactctggcgttggcggctgccggcctgccgggg
gcaatgctgcattcggcggcttttgccgccgagccgcagcagacagagccacagcaaact
tctgactcaacagagcaggaggccgccaatcagaccaagatcaatcaggaagacctggaa
cacatagaagtcacaggttaccgccgcagccttattgattcactcaatgccaaacgcttt
ggcgataccgtttccgagcagttgtccgccgatgacctgggcgccttgcccgacgtgtcg
atggctgatgctctgacccgcctgccggggatctcggcggtgcgcaccggcggtcaggcg
gcggaaatcaatatccgcggcatgtccggcggttttgtgttttccaccctcaatggtcgt
gagcaggtgtccaccagtggctcccgcagcatcgaattcgatcaatacccttcggagttg
atcagctccgccgccgtgtacaagtcgcccaaggcatcgctgatagaaggcggtctggcg
ggcacggtggagctggccaccgccagtcccctgacggcggacaaggagcagaatgtcacg
ctcaacgtccgtggcatgtacaacgacagggccagcgaagtgtatggcgccgaggaattc
ggccacagactgagcttttcctatcagggcaagttcctcgatgaaaccctgggggtggcc
ctgggctatgcccggctggagcagccgagcgttgccacccagtttatcggtctggcctac
aacgacagcaaggatgtggacggcctggccaacgacaccaatggtccggatggcgggctg
aacaaggagtacatcagcgaaggcttcgagttgcagcatcttggtgggcttgaggtgcgt
aacggctatatgggcgccatagagtgggcgccggtcagcaatttcaagctcaaggccgat
gccttcctgtcgcgctttgacagcgaggcctttgcccgcggcttccgggtcaaactcggc
ggtcccaacgttgccgtggccaaccccgtgctcgacggcaatgcggtcatcggcggcacc
ttcaaccgcacctcaagcagctatacccgggtggaattggtcaacgatgacaaccaggac
ttcgatcaggtcaacagcttcggggtcaacgccgactggcaagtgaccgacaggctgaat
gtggcggcggacgtgtcctattcctccgccaagagcgatttccgcaacggcctgctgtgg
tcaaacgtggccgtggatgccaatgccgacaagccgctgttcgatgaaaacgtctccatc
agctatcagctcaatggtctcgacctgccggatctgggctttaatcaggccgatgctttc
tccgacatcaatcgggtgatggtgagcaagtacggcatttatccctatgaaaacgaagat
gaagtcaaagcctatcgcctggacttcaagtacgatctcgacagcgactggctggcatcg
gtggagtttggcgtgcgttggtccgacaggacctacagcaatgaccgttctgtatttgag
ttcggcaacgacggtggcttctccagcactgagccgccgctgcaactgacagaggacatg
gtgaccgtggtggactggagcggcgacttcagctacttcccctcctatttggcgatcgat
ctcgaccaggccctcaatgcctggttccccgaagggatcccgcagccggtgcaaacctgg
ggtaatgccattggcgtcatcgatcccatgggttacaccactaactatgcctggtcggtg
cagcaaagcggcgaggtgtacgaaaaggtgctggcgagctacctgatgttcaatattgac
accgaaatcggcggtttgccgctgacgggcaacataggcctgcgccgggtggatacggat
cagtcggccaccctgttgcagaacgtcggtggtgatcctgcccagggcgcacagtacatt
gtcgatgaggttggtataatcaacaagttctatgccccaaccgtagttggagttacctat
accgactacctgccatccctgaacctgagtctcaagcttaccgacgatagccaactgcgt
tttgccgccgccaaggtgatggcacggccgcccatcaaccgcctggcgggggatgccagc
gccactaccaataacgatggtataattaacggctccagcaccaacaaccccttcctgaag
cccttttatgccacccagtatgacctgtcctacgagcactacttcgaggaaggggctctg
gtggcggcgctgttctacaagaacatcgattcctttatcgacgaatttgacatcgttggc
tttgattttcgcgccaatggcttcaacgtgcccgattacatagtgagtccgagtggagag
caaatcgccaccaccaacggcacctatactacggcagtaaacaataccgaaggcggctat
atccgcggtctggaactggcctacacccaggtgtttgcctccttgcccagtccatttagc
ggactcggtctcaacgccagctactcctattccgagagcgaggtgcagaagttcaccgat
cttggaggcaacagtgtgccgcaaaccctggaaggtctgtcgaaacacgtcgccaacctg
accctgttctatggctatgaaggttttgagacccgtgtcagcgcccgctaccgctcgtcg
tttgtgtccgagcaggtggccgtcaacagccaggtggtgaatttcgatgccgaaaccgtg
ctcgattaccaggcctcctaccagattaatgacaatctcggggtgctgttccaggtcaac
aacctcaccgacgagcccaccaagagttacttcggcaccgaggccaagacaggcacgctg
cagtacttcggccgtcaattcttcctgggggtgacctatgccatgtaa
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