KEGG   Shewanella cyperi: JYB88_02280
Entry
JYB88_02280       CDS       T07829                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K07714  two-component system, NtrC family, response regulator AtoC
Organism
scyp  Shewanella cyperi
Pathway
scyp02020  Two-component system
Brite
KEGG Orthology (KO) [BR:scyp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    JYB88_02280
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:scyp02022]
    JYB88_02280
Two-component system [BR:scyp02022]
 NtrC family
  AtoS-AtoC (cPHB biosynthesis)
   JYB88_02280
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 AAA Mg_chelatase AAA_2 HTH_50 AAA_22 AAA_7 AAA_30 TP_0454_N RsgA_GTPase Grg1
Other DBs
NCBI-ProteinID: QSX30510
UniProt: A0A975AKU0
LinkDB
Position
complement(537840..539186)
AA seq 448 aa
MKVLKILVVDDEIAIRQVLAHAIRRLGHEVITAKDAEEALTEMAANEVDVTFSDVRMPGM
TGIELIEEARRRGHECFFVIMTAFASVSTAIDAMRSGAYDYMMKPLRNEDVEHRIKLIAD
LIDLRNENHALRNAAMQVSDKVFHSASEAMARVDRIVAKVANTDATLMICGASGSGKGVT
AKNIHNASRRANKPFIPVNCAAIPEQLLESELFGHSKGAFTGASTKKIGLFEAASGGTLF
LDEIGELPLAMQAKLLHVLEDKQIRPVGSDRFTPVDVRIIAATNRDLPGMIERNEFREDL
YFRLNVFSILLPSLSERREDLLPLFRFFLENERKKLGLSQSFEIDAEVEAVLLGYDFPGN
IRELENIAERAVILAEDNLIRVEDLPQQLYKRAGVSLPEETNLRDRLKQYEQQIIKETLD
SVDGDRRAAAKLLGLGLSSLYRKLEEYS
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgaaagtactgaaaatactggtagtagacgacgagatagccataagacaggtgctggcg
cacgccattcgccgcctcggccacgaagtcattaccgccaaagacgccgaagaggccctg
accgaaatggccgccaatgaagtggatgtcaccttcagcgatgtacgcatgccgggcatg
acaggcattgaattgatagaagaagccaggcgtcggggacacgagtgtttctttgtcatc
atgaccgcctttgcctcggtatcaaccgccatagatgccatgcgctccggcgcctacgac
tacatgatgaaaccgctgcgcaacgaggacgtggaacacaggatcaagctcatcgctgat
ctgatcgatttgcgcaacgaaaaccacgccctgcgcaatgccgccatgcaggtgtccgac
aaggtgtttcattccgcttccgaagccatggccagggttgatcgcatagtcgccaaggtg
gccaataccgatgccaccctgatgatctgcggcgccagtggctcgggcaaaggggtgacg
gccaaaaatattcacaatgccagccgccgtgccaacaagccgtttattccggttaactgt
gccgccattcccgagcaactgctggaaagcgaactctttggccacagcaagggcgccttc
accggtgccagcaccaagaaaattggtctgtttgaggccgcatcgggtggcaccctgttc
ctcgacgagataggggaattacccctggccatgcaggccaagctgttgcacgtgctggaa
gacaagcaaatccgccccgtgggcagcgatcgctttacccctgtggatgtgcgtatcatt
gccgccaccaaccgcgatctgccgggcatgattgaacgcaacgaatttcgggaagatctc
tatttccgcctcaatgtgttttccatcctgctgccatccctcagcgaaagacgcgaagac
ctgctgcctctgttccgatttttcctggaaaacgagcgcaagaagctcggtctcagccag
agctttgagatagatgccgaagtggaggccgtgttgttgggctatgatttccccggcaac
atacgggagttggaaaacattgccgaacgggcggttatcctggcggaagacaacctgatc
cgggtggaagatttgccgcaacagctgtacaagcgtgccggtgtcagcttacctgaggag
accaacctcagggatcgcctgaaacaatacgaacaacagattatcaaagaaaccctggac
agcgtcgacggtgaccgccgcgccgcggccaaacttctcggtcttggcctgtccagtctg
taccgcaagctggaggaatactcatga

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