KEGG   Shewanella cyperi: JYB88_02960
Entry
JYB88_02960       CDS       T07829                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
scyp  Shewanella cyperi
Pathway
scyp00061  Fatty acid biosynthesis
scyp00071  Fatty acid degradation
scyp01100  Metabolic pathways
scyp01212  Fatty acid metabolism
scyp02024  Quorum sensing
scyp04146  Peroxisome
Module
scyp_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:scyp00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    JYB88_02960
   00071 Fatty acid degradation
    JYB88_02960
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    JYB88_02960
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    JYB88_02960
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:scyp01004]
    JYB88_02960
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:scyp04147]
    JYB88_02960
Enzymes [BR:scyp01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     JYB88_02960
Lipid biosynthesis proteins [BR:scyp01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   JYB88_02960
Exosome [BR:scyp04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   JYB88_02960
  Exosomal proteins of breast cancer cells
   JYB88_02960
SSDB
Motif
Pfam: AMP-binding AMP-binding_C AMP-binding_C_2
Other DBs
NCBI-ProteinID: QSX30638
UniProt: A0A974XNT9
LinkDB
Position
complement(711358..712953)
AA seq 531 aa
MLYDTESELKIEYSSLVDLIDASCKRYGDKPAFACLGKEHSFREIHTLANAFGAWLQQQP
LLQPGDRIAIQLPNLTQFVIAAYGALKAGLVLVNTNPLYTERELIHQFKDSGAKALVVLS
DLLPILAKVVANTPVELVISTHPLDLLAPQVQPKTGLKNVEFMQVLQQGMGMELKPVTAD
HASLAALQYTGGTTGVSKGAMLSHGNLLANAAQCQSRLGTVITEGQDIFVAPLPIYHIYA
FLVNLVLYFERGACSVLIPSPRDIAGLIKTLAKYPFTGFAGLNTLFVGLCHQAEFKALDF
SHLKVTISGGTALTEAAAKLWQQTTGCTISEGYGLSETSPVVSLNAPGLERLGTIGKPVL
DTRVKILDGNDVEVALGEAGELAVAGPQVMSGYWQQAEENARVFTADGFFRTGDVAVADA
EGFLRIVDRKKDMIIVSGFNVYPNEVENVLAGHPAVLECAVIGVADEKSGEAVKAFIVLT
QEVENQQQARDGIMQHCEANLTGYKLPRQIEFVPQLPKSTVGKVLRRALRS
NT seq 1596 nt   +upstreamnt  +downstreamnt
atgctgtatgacactgaatcagaattaaaaattgaatactcatccctggtggatctcatc
gatgccagctgtaagcgctatggcgacaagcccgcctttgcctgtctgggcaaagagcac
agttttcgcgaaatccataccctggccaacgccttcggtgcctggttacaacagcaacct
ctgttgcaaccgggggacagaattgccattcagctgcccaatttgacccagtttgttatc
gccgcctacggtgccctaaaggccgggctggtattggtcaacaccaatcccctctatacc
gagcgcgagctgatccatcagttcaaagactcgggggccaaggccttggtggtactgtcg
gatctgttacccatattggccaaggtggtggccaacacgccggtggaactggtgatatcc
acccatccgctggatctgctggccccccaggtgcaacccaagacagggctgaaaaatgtg
gaattcatgcaggtgctgcaacagggcatgggcatggagctgaagcccgtcacggccgat
cacgccagcttggcggcactgcaatacacgggcggtaccacgggggtgtcgaagggggcc
atgctcagtcatggcaacctgttggccaacgcggctcagtgccaatcccggctggggaca
gtgataaccgaggggcaggacatctttgtcgcccccctgcccatctatcacatctatgcc
tttctggtgaacctggtgctctatttcgagcgcggcgcctgctctgtgctgatccccagc
ccgcgggatatagccggcctgataaagaccctggccaagtatccctttaccggctttgcc
ggcctcaacaccctgtttgtgggtctgtgccatcaggccgaattcaaggccctggatttc
agtcacctcaaggtcaccatctcagggggcacagccctgaccgaggcagccgccaaactt
tggcaacagaccacgggctgcaccatcagcgagggctatgggctgtcggaaacctccccc
gtggtcagcctcaatgccccgggattggaacgccttggcaccataggcaaacctgtgctc
gataccagagtgaaaatcctcgatggcaacgatgtcgaagtggcacttggcgaagccggg
gaactggcggtggccggaccccaggtaatgagtggctactggcagcaggcagaagaaaat
gcccgggtgtttaccgccgatggtttctttcgcaccggcgatgtggccgtggccgatgcc
gagggctttttgcggatagtggatcgcaaaaaagacatgattattgtctcgggctttaac
gtctatcccaacgaggtggagaacgtactcgccggtcacccggcggtactggagtgcgcc
gtcataggcgtggccgacgagaaaagtggcgaggcggtcaaggcctttatcgtgctgacc
caagaggtggaaaatcagcagcaggcgagggacggaataatgcagcactgcgaggccaat
ctcaccggctataaattgccgcggcagatagagtttgtcccccagctgcccaagagtacg
gtcggcaaggtgctgcgccgggcgctgcgcagctaa

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