Shewanella cyperi: JYB88_03415
Help
Entry
JYB88_03415 CDS
T07829
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
scyp
Shewanella cyperi
Pathway
scyp00250
Alanine, aspartate and glutamate metabolism
scyp00310
Lysine degradation
scyp00350
Tyrosine metabolism
scyp00650
Butanoate metabolism
scyp00760
Nicotinate and nicotinamide metabolism
scyp01100
Metabolic pathways
scyp01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
JYB88_03415 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JYB88_03415 (gabD)
00310 Lysine degradation
JYB88_03415 (gabD)
00350 Tyrosine metabolism
JYB88_03415 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
JYB88_03415 (gabD)
Enzymes [BR:
scyp01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
JYB88_03415 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
JYB88_03415 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
JYB88_03415 (gabD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
QSX31758
UniProt:
A0A975AMX1
LinkDB
All DBs
Position
816577..818019
Genome browser
AA seq
480 aa
AA seq
DB search
MQLKDPSLFKQQCYIDGQWCDAASGLTVAIADPASGEVLGQVPVMGQSETKSAIEAADKA
LGPWRALTAKDRAAVLRRWFELINQHSDDLALLMTREQGKPLAEAKGEVGYAASFIEWFA
EEAKRVYGETIPGHQGDKRIMVIKQPVGVCAAITPWNFPAAMITRKVGPALAAGCSMVVK
PAPQTPFTALALAELADRAGIPPGVLNIVCGDAVAIGNELCANPTVRKLSFTGSTAVGSK
LMAQCAPNIKKLSLELGGNAPFIVFKDADLDAAVAGAMISKYRNAGQTCVCANRIYVQDE
VYDAFAAKLAKAVAELRVGKGTEPGVTTGPLINAAALTKVQDHLQDALSKGAKLLLGGKS
LGGNFMEPAIITEANSSMKLAREETFGPLAPLFRFKEVDEVIRMANDTEFGLAAYFYGRD
LSLVWHVAEALEYGMVGVNTGLISTEVAPFGGIKSSGLGREGSRHGIEEYLELKYICLSV
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
gtgcaattaaaggatccaagcctgtttaagcagcagtgttatatcgacggtcagtggtgc
gatgccgcatcgggcctgacagtggccattgccgatcccgccagcggtgaagtgctgggg
caggtgcctgtgatgggccaatccgaaaccaaaagtgccatcgaggccgccgataaggcg
ctgggcccctggcgcgccttgaccgccaaggatcgcgccgcggtgctcaggcgctggttt
gagctcatcaaccagcacagtgacgatctggcgctgctgatgacccgcgagcagggcaaa
ccgctcgccgaagccaagggcgaggtgggctacgcggcctcctttatcgaatggtttgcc
gaggaggccaagcgggtctacggcgagaccatacccggtcaccagggcgacaagcgcatc
atggtgatcaagcagccggtgggcgtctgcgccgccatcaccccctggaacttccccgcc
gccatgatcacccgcaaggtgggcccggcgctggcagcaggttgcagcatggtggtcaag
cccgcgccccagaccccctttaccgccctggccctggccgaattggctgacagggccggg
atcccgccaggggtgctgaacattgtctgcggtgatgctgtggccataggcaacgagctg
tgcgccaatcccactgtgcgcaagttgtccttcaccggctccactgccgtgggcagcaag
ctgatggcccagtgcgcgcccaatatcaagaagctgtcgttggagctgggcggcaacgcg
ccctttatcgtgttcaaggatgcggatctcgacgcagcagtcgccggcgccatgatctcc
aagtaccgcaacgccggccagacctgtgtctgcgccaaccgcatctatgtgcaggatgag
gtctacgacgcctttgccgccaagctggccaaggccgtggccgaactcagggtgggcaag
ggcacagagcccggagtcaccacagggccactgatcaatgccgcggcgcttaccaaggtg
caggatcacctgcaggacgcgctgtccaagggcgccaaactgctgctgggcggcaagtcc
ctcggcggcaactttatggagcccgccatcatcaccgaggccaacagcagcatgaagctc
gcccgggaggaaaccttcggcccgctggcgcccctgttccgttttaaggaggtggacgaa
gtgattcgtatggccaacgacaccgagtttggtctggcggcctacttctacggccgggat
ctgtcgctggtgtggcatgtggccgaggcgctggagtacggcatggtgggggttaatacc
ggccttatcagcacagaggtggcgccctttggtggcatcaagtcttcgggcctgggccgt
gagggctcaaggcacggcatagaggaatatctggaactcaaatacatctgcctgtcggtg
tag
DBGET
integrated database retrieval system
