Shewanella cyperi: JYB88_03420
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Entry
JYB88_03420 CDS
T07829
Symbol
gabT
Name
(GenBank) 4-aminobutyrate--2-oxoglutarate transaminase
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
scyp
Shewanella cyperi
Pathway
scyp00250
Alanine, aspartate and glutamate metabolism
scyp00280
Valine, leucine and isoleucine degradation
scyp00310
Lysine degradation
scyp00410
beta-Alanine metabolism
scyp00640
Propanoate metabolism
scyp00650
Butanoate metabolism
scyp01100
Metabolic pathways
scyp01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
JYB88_03420 (gabT)
00650 Butanoate metabolism
JYB88_03420 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JYB88_03420 (gabT)
00280 Valine, leucine and isoleucine degradation
JYB88_03420 (gabT)
00310 Lysine degradation
JYB88_03420 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
JYB88_03420 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scyp01007
]
JYB88_03420 (gabT)
Enzymes [BR:
scyp01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
JYB88_03420 (gabT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
JYB88_03420 (gabT)
2.6.1.48 5-aminovalerate transaminase
JYB88_03420 (gabT)
Amino acid related enzymes [BR:
scyp01007
]
Aminotransferase (transaminase)
Class III
JYB88_03420 (gabT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Motif
Other DBs
NCBI-ProteinID:
QSX30724
UniProt:
A0A974XLS0
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All DBs
Position
818039..819319
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AA seq
426 aa
AA seq
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MTKNNASLMARRQAAVATGVGQIHPVFAERAENARVWDVEGKEYLDFAGGIAVLNTGHLH
PKVKAAVAAQLEHFSHTCFMVLGYESYVALCEKLNNLVPGKFAKKTALFNSGSEAVENAI
KVARAATGRAGVIAFTSGYHGRTMAALALTGKVAPYSKGMGLMQANVFRARFPSALHGIS
EDDAMDSIAQIFRNDAEPADIAAIILEPVQGEGGFYVASPGFMQRLRQLCDREGIMLIAD
EVQTGAGRTGTFFAMEQMGVAADITCFAKSIAGGFPLSGITGKAEIMDAIGPGGLGGTYG
GNPLACAAALAVIEVFEQEKLLARSQAIGQQLTRGLRQLQHQYDQIAEVRGLGAMVAMEL
MEDGAPAPQYSAPILAAARERGLILLSCGTFGNVLRILVPLTASDEDISEGLAILGESLK
AVLGGG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagaacaatgcttccctgatggcaagacgccaggcggccgtggccaccggtgtt
ggccaaattcaccccgtgtttgccgagcgggccgaaaatgcccgggtgtgggacgtggaa
ggtaaggagtacctggactttgccggcggtatcgccgtgctcaacaccgggcatctgcat
cccaaggtcaaggccgcggtggcggcccagctggagcatttctcccacacctgttttatg
gtgctggggtacgagagctatgtggccctgtgtgaaaagctcaacaacctggtgccgggg
aaatttgccaagaagacggccctgttcaacagcggttccgaggcggtggagaacgccatc
aaggtggcccgcgccgccacgggccgggccggggtcatagcctttacctcggggtaccat
ggccgcaccatggccgccctggccctgaccggcaaggtggcgccctacagcaagggcatg
ggcttaatgcaggccaacgtattccgggcacgctttcccagcgccctgcacggcatcagc
gaagatgacgccatggactccatagcgcagatcttccgtaacgatgccgagcccgccgat
atcgccgccatcatacttgagcctgtgcagggggagggtggtttctatgtggccagtccg
ggctttatgcagcgcctgcggcagctgtgcgatcgcgaaggcataatgctgatagccgat
gaggtgcagaccggcgccggtcgtaccggcacctttttcgccatggagcaaatgggcgtg
gccgccgacatcacctgttttgccaaatccattgccggcggcttccccctgtcggggatc
acaggcaaggcggagatcatggacgccataggcccgggaggactgggtggcacctacggc
ggcaatccgctggcctgcgccgcggccctggcagtgatcgaggtgtttgagcaggagaaa
ctcttggctcgctcccaggccataggccagcagctgacccgcgggctgcgtcagctgcaa
caccaatacgaccaaatcgccgaggtgcgcggtctcggggccatggtggccatggagctg
atggaagatggcgccccggcaccccagtacagcgcgcccatattggcggcggcgcgggag
cggggactgatcctgctctcctgcggtacctttggcaatgtgctgcgtattttggtgccc
ctgaccgcttccgatgaggacatctccgaggggctggccatcctgggtgagtcgcttaag
gccgtgcttggcggcggctaa
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