Shewanella cyperi: JYB88_04145
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Entry
JYB88_04145 CDS
T07829
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyp02000
]
JYB88_04145
Transporters [BR:
scyp02000
]
Other transporters
Pores ion channels [TC:
1
]
JYB88_04145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
TSP_3
MipA
Opacity
OprF
Motif
Other DBs
NCBI-ProteinID:
QSX30855
UniProt:
A0A975AL56
LinkDB
All DBs
Position
complement(977045..978160)
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AA seq
371 aa
AA seq
DB search
MMNNSLKALLLVSALPFAANAADGLSPWYAGAGLGINNYEPNCDQKTMMTCGEDDPYAWD
VFGGFLFNEHFGVELGYRDLGRAEWVDYSNVLNDVGARGLSLGLVAFFPIAEKWSLSAEA
GAMDYLLYNNKQWGSQYYSDSGIAPYIGAGVGYQLTENLKLQAKYRRYENLDDDAFNTLE
MESNYWGLELSYRFGESKKAAPAPAPVPMVKEEPKDSDMDGVFDEQDQCPATPSNHKVDS
KGCTIYKDDVSTYTLGSLRFANNSSVINPNSYADIEKLANYMNQHPGSTVEIGGHASNVG
NPDYNLKLSDKRAQATAKVLVEKYGIAASRVSAKGYGITMPVMDGNSDEAHAANRRVEAV
VTGSEKVAVLK
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacaattctttgaaagcattactgctggtatcggcactgcccttcgctgccaat
gcagcagacggcctcagcccctggtatgcgggcgcaggtttaggtatcaacaactacgaa
cccaattgcgatcagaaaaccatgatgacctgtggtgaagatgatccttatgcctgggat
gtgtttggtggtttcctgtttaatgaacatttcggtgttgaactgggctatcgcgatctg
ggccgcgccgaatgggtcgattacagcaacgtgctcaacgatgtcggcgcccgtggcctg
agcctgggcttggtggcctttttccccatcgccgaaaagtggagtctgtcagccgaagcc
ggtgccatggattacctgctgtataacaacaagcaatggggcagccaatattatagtgac
agcggcatagccccctatattggcgcaggtgtcggttatcaactgaccgagaatttgaag
ctgcaagccaaataccgccgctatgaaaatctggatgacgacgccttcaataccctggaa
atggaaagcaattactggggcctggaactgagctaccgtttcggcgagtccaagaaggca
gcgccggcaccggctcctgtgcccatggtgaaggaagagcctaaagacagtgatatggac
ggcgtatttgatgagcaggaccaatgtccggcaaccccatccaatcacaaggtcgacagc
aaaggctgcaccatctacaaggatgatgtcagcacctataccttgggttcactgcgtttt
gccaacaattcttcggtaatcaacccaaattcttatgctgatatcgaaaaattggccaac
tacatgaaccaacatccaggttctaccgttgagattggcggccatgcctccaacgtgggc
aatcccgactacaacctcaagctgtctgacaagcgcgcccaggctactgccaaggtgctg
gttgaaaagtatggtatcgcagcttcaagagtctccgccaaaggttatggtattaccatg
ccggtgatggatggcaacagcgacgaagcccacgccgccaaccgtcgcgtggaagccgtg
gtgacaggttctgagaaagttgcagtactgaagtaa
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