Shewanella cyperi: JYB88_04345
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Entry
JYB88_04345 CDS
T07829
Symbol
rlmE
Name
(GenBank) 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scyp03009
]
JYB88_04345 (rlmE)
Enzymes [BR:
scyp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
JYB88_04345 (rlmE)
Ribosome biogenesis [BR:
scyp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JYB88_04345 (rlmE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Methyltransf_31
Ubie_methyltran
Methyltr_RsmB-F
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
QSX30889
UniProt:
A0A974XM34
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All DBs
Position
1022807..1023436
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AA seq
209 aa
AA seq
DB search
MSGKKRTASSTRWMQEHFDDHYVKLAQKRGLRSRAAFKLEELQQKDQLIKPGMTVVDLGA
APGGWSQVAVKLVGDKGKVVACDILPMDPIVGVDFLQGDFREEKVLNALLERVGEDKVDI
VLSDMAPNMSGSDGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKAVKE
AFRVVKTRKPDSSRARSREVYLVATGYKL
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaaagaaacgaaccgccagctccacccggtggatgcaggaacactttgatgat
cactatgtcaaactggcacaaaaacgcggcctacgctcgcgtgcagccttcaagctcgaa
gagctgcagcaaaaggatcaattgattaaaccgggtatgacagtggtcgacctgggggct
gcgcccggtggctggtcccaggtggcagtgaaactggtgggggataagggcaaggtcgtt
gcctgtgatattctgcccatggatcccatagttggcgtagacttcctgcagggggacttt
cgggaagagaaggtgctaaacgcgttgcttgagcgggttggcgaggataaagtggatata
gtgctgtccgatatggcgcccaatatgagcggctcggatggtgtagatcaaccgcgagcc
atgtatctggtggaattggcgctggatatgtgtcatcaagtgttggcgcccaacggcagc
tttgccgtcaaagtttttcagggggagggctttgacgagtatatgaaggcggttaaagag
gcgttcagggtcgtcaagacccgcaaaccagactcatccagggcccgttcccgggaagtc
tatctggtagcgacagggtataagttatag
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