Shewanella cyperi: JYB88_04645
Help
Entry
JYB88_04645 CDS
T07829
Symbol
ribB
Name
(GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
scyp
Shewanella cyperi
Pathway
scyp00740
Riboflavin metabolism
scyp00790
Folate biosynthesis
scyp01100
Metabolic pathways
scyp01110
Biosynthesis of secondary metabolites
scyp01240
Biosynthesis of cofactors
Module
scyp_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
JYB88_04645 (ribB)
00790 Folate biosynthesis
JYB88_04645 (ribB)
Enzymes [BR:
scyp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
JYB88_04645 (ribB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
JYB88_04645 (ribB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-ProteinID:
QSX30940
UniProt:
A0A974XM50
LinkDB
All DBs
Position
1095248..1096351
Genome browser
AA seq
367 aa
AA seq
DB search
MALHSIEEIIEDIRQGKMVILMDDEDRENEGDLIMAAELVTPEAINFMATYGRGLICQTM
TKARCQQLNLPLMVSNNNAQFSTNFTVSIEAAEGVTTGISAHDRAVTVKAAVAKDAKAAD
LVQPGHIFPLMAQDGGVLTRAGHTEAGCDLARLAGLEPSGVIVEILNEDGTMARRPDLEI
FSEKHGIKIGTIADLIEYRNNTETTVVREAQCRLPTRFGEFEMHTFRDTIDNQLHFALVK
GEVKEDILVRVHLTNTFNDLLHSERDQQRSWPLEVAMERIAKEGGVLVLLGNREHSSDIL
AKVKAFEAEDKGQAPASAKWAGTSRRVGVGSQILASLGVTRMRLLSSPKKYHSLSGFGLE
VTEYVAE
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggcgctacacagtatcgaagagatcatcgaggacatacgtcagggcaaaatggttatc
ctgatggacgatgaggacagggaaaacgagggcgacctgattatggctgctgagctggtg
acccccgaggccatcaacttcatggccacctatggccgtggcctcatctgtcagaccatg
accaaggcccgttgccagcagctgaacctgccgctgatggtaagcaacaacaatgcccag
ttctccaccaactttaccgtgtccatcgaggccgccgaaggcgtgaccacggggatcagt
gcccacgaccgtgcggtgaccgtcaaggccgccgtggccaaggatgccaaggccgccgat
ctggtgcagcccggtcatatcttccccttgatggcccaggatggcggcgtgctgacccgc
gccggtcacaccgaagccggttgcgatctcgcccgtctggcaggccttgagccttccggc
gtgatagtggaaatcctcaacgaagacggcaccatggcccgccgtcctgatctggaaatc
ttctccgagaagcacggcatcaagataggcaccattgccgatctgattgaataccgcaac
aacacagaaaccactgtggtgcgcgaggcccagtgccgcctgccgacccgtttcggtgag
tttgaaatgcacaccttccgcgacaccatagacaaccagctgcactttgccctggtgaag
ggcgaggtcaaggaagacatactggtgcgggtgcacctgaccaacaccttcaacgacctg
ctgcactccgagcgggatcagcagcgcagctggccgctggaagtggccatggagcgcatc
gccaaagagggtggtgtgctggtgctgctgggtaaccgtgaacacagcagcgatatcctg
gccaaggtcaaggccttcgaggccgaggacaagggccaggcgccggcatccgccaagtgg
gcaggtacctcgcgccgtgtgggtgtgggctcacaaattctggcgagcctgggtgtcacc
aggatgcgactgctgagctcaccgaagaagtaccattcgctgtcgggcttcggtctggaa
gtgactgagtacgtggccgagtaa
DBGET
integrated database retrieval system
