Shewanella cyperi: JYB88_05415
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Entry
JYB88_05415 CDS
T07829
Symbol
lpxD
Name
(GenBank) UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase
KO
K02536
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:
2.3.1.191
]
Organism
scyp
Shewanella cyperi
Pathway
scyp00540
Lipopolysaccharide biosynthesis
scyp01100
Metabolic pathways
Module
scyp_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
JYB88_05415 (lpxD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
scyp01005
]
JYB88_05415 (lpxD)
Enzymes [BR:
scyp01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.191 UDP-3-O-(3-hydroxyacyl)glucosamine N-acyltransferase
JYB88_05415 (lpxD)
Lipopolysaccharide biosynthesis proteins [BR:
scyp01005
]
Lipid A
JYB88_05415 (lpxD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hexapep
LpxD
LbH_EIF2B
GMPPB_C
Hexapep_2
Hexapep_GlmU
DCTN5
Urocanase_C
Motif
Other DBs
NCBI-ProteinID:
QSX31081
UniProt:
A0A975ALS0
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All DBs
Position
1288385..1289410
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AA seq
341 aa
AA seq
DB search
MASVTLGELATLLNAELRGDANIAINSVATLESAQSGQISFLANSKYRSQLDSTRASAVL
LTAADAEQYQGMALVLRDPYVGFARVAQLLDTTPKAAEGIHPSAQIDPSAMLGEGVAIGA
NAVIGPRVILGEKVQIGPGCVIGQDCILGSGTKLWANVTLYHDVHLGTDCLIHSGAVLGS
DGFGYANERGQWVKIPQTGGVRIGNKVEIGAGTTVDRGALAHTEIHDGVILDNQVQIAHN
DIIGAHSAIAGCTVLAGSVNLGKHCIVGGNSAIAGHLTIADGTMISGGTNVTSAITKPGV
YSSATVAMENKVWRRNTVRFRQLDELFQRVKALESTQKTEE
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgtgaccctgggtgaactagccaccctgctcaatgccgagttacgtggcgat
gccaacatcgccatcaactcggtcgccacactggagtctgcccaatcggggcagatttcc
tttttggcgaacagcaaatatcgctcccaattggacagcacccgcgccagcgccgtgctc
ttgaccgcagccgatgccgagcaataccaaggtatggcactggtgctgcgtgacccctac
gtgggctttgctcgtgtcgcccaattgctggataccaccccaaaggccgcagaagggata
catccctcagcccagatagacccttcagccatgctgggcgaaggcgtcgccataggtgcc
aatgcggtgattggtcccagggttattctgggggaaaaggtgcagataggacccggctgt
gtcataggtcaggattgtatccttggcagcggcaccaagctgtgggccaatgtcaccctg
taccatgatgtgcatttaggcacggattgccttatacattcgggcgcagtgctgggctca
gatggtttcggctacgccaatgaacgcggccaatgggtgaaaatccctcagaccggcggc
gtgcgcatcggcaacaaggtcgaaatcggagccggcaccacggtcgacagaggtgctttg
gcacacacagaaattcatgatggcgttatcctggataaccaggtgcagattgcccataac
gacatcataggcgcccattccgccatcgccggttgtactgtactcgcaggcagcgtgaat
ctgggcaagcattgtatcgtcggtggcaacagcgccatcgccggccatctgaccatagcc
gatggtaccatgatcagcggtggcaccaatgtcaccagcgccatcaccaagcccggagtt
tactcctcggccactgtggcgatggaaaacaaggtctggcgtcgcaataccgtgcgcttc
aggcagctggacgagttgttccagagggtgaaggccctcgaaagtacacagaaaacagaa
gagtga
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