Shewanella cyperi: JYB88_05555
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Entry
JYB88_05555 CDS
T07829
Name
(GenBank) H-NS histone family protein
KO
K03746
DNA-binding protein H-NS
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scyp03036
]
JYB88_05555
03400 DNA repair and recombination proteins [BR:
scyp03400
]
JYB88_05555
Chromosome and associated proteins [BR:
scyp03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
JYB88_05555
DNA repair and recombination proteins [BR:
scyp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JYB88_05555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
GCIP_C
GemA
Nre_N
XhlA
Motif
Other DBs
NCBI-ProteinID:
QSX31108
UniProt:
A0A974XPM0
LinkDB
All DBs
Position
complement(1321276..1321671)
Genome browser
AA seq
131 aa
AA seq
DB search
MSEFLEILTHGRRFKAAVKDLSVADLRDVAAKLEKVIADREAEAEEELKANAERIAKIEE
IRKQMAEIGLSVDDLGVTGVAKPAGKKRAPRPAKYQIEVNGETVTWTGQGRMPTVFKNEM
DKGRSMDDFLI
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatttctggaaatattgactcatggtcgccgttttaaagccgctgtaaaagat
ttgtcagttgccgatctccgtgatgttgcagccaagttggaaaaagtgattgctgatcgc
gaagccgaagccgaagaagaattgaaggccaatgccgagcgcatcgccaagattgaagaa
attcgcaagcaaatggctgaaatcggtttgtctgtagatgatctgggcgtaaccggtgta
gccaagcctgccggtaaaaagcgtgcgccacgccctgccaaataccaaattgaagtcaat
ggcgagacagtgacctggactggtcaaggccgcatgccaaccgtattcaagaatgaaatg
gacaagggtcgttcaatggatgatttcctcatctaa
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