Shewanella cyperi: JYB88_05570
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Entry
JYB88_05570 CDS
T07829
Name
(GenBank) Na+/H+ antiporter NhaC family protein
KO
K18218
tetracycline resistance efflux pump
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyp02000
]
JYB88_05570
01504 Antimicrobial resistance genes [BR:
scyp01504
]
JYB88_05570
Transporters [BR:
scyp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JYB88_05570
Antimicrobial resistance genes [BR:
scyp01504
]
Gene variants
Tetracycline resistance genes
Transporters
JYB88_05570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_H_antiporter
Tad
Motif
Other DBs
NCBI-ProteinID:
QSX31111
UniProt:
A0A975ALS9
LinkDB
All DBs
Position
1324061..1325626
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AA seq
521 aa
AA seq
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MTVMSYAESVLSLLPPVVAIVLAILTRRVLVSLGLGIVAGILLLSDFSPLDACQLLGERV
VALVWSDGAPNSWNLYILGFLVLLGMITALISASGAARAFADWARGRIRNKRDAQLLTLF
LGCVVFIDDYFNSLVVGSIARPLTDRYYVSRAKLAYLLDSTAAPVCVISPVSSWGAYIIA
LIGGILASHGVSDTGHLAVFIQLIPMNFYAIFALAMLLCVVLFGLDVGAMRRHEQFAQRG
NLYDETKGVPPGSNVELPEEGSGKVAGLFVPIGVLVLATVSFMIGSGAMALADAGLPFSL
IGAFEKTDVGASLFFGALLGLSATLALVLWQGMAPRLVKRASVQGARSMVPALYILLFAW
TIAGIIGELGTGKYMASLAGGNLPFALLPALMFVLAGLTAFATGTSWGTFGIMLPIAADM
AMGSHSAMMLPMLASVLAGAVFGDHCSPISDTTILSSTGASCHHIDHVLTQLPYALIVAF
ISLVGYTVMGVTESVWAGFGVASLTFVLAVLWLKHKSGARD
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaatgagttacgccgaatcggtgctgtctctgctgccacctgtggtggcaatc
gtgttggccattttgacccgcagggtgctggtgtcccttgggctgggcattgtggccggg
atcctgctgctgagtgacttttctccccttgatgcctgccagctgctgggtgaacgggtg
gttgccctggtgtggagcgatggtgccccaaacagctggaacctgtacattctgggattt
ctggtgctgcttgggatgatcaccgcccttatcagcgccagtggggcggcccgggccttt
gccgactgggccaggggacggatccgcaataagcgcgatgcccaattgctgaccctgttt
ctgggctgtgtggtctttatcgacgactatttcaacagcctggtggtgggctccatcgcc
cggcctctgaccgacaggtattatgtgtcccgggccaagctggcttatttgctggactcc
accgccgcccccgtgtgtgtgatttccccagtgtcgagttggggagcctatatcatagcc
ctgataggtggcattctggcatcccatggcgtcagcgacacaggtcatttggcggtattt
atccaactgatcccgatgaacttctatgccatttttgccctggcaatgctgctgtgcgtg
gtgctgttcggtctggatgtgggggccatgcgccggcatgagcaatttgcccagcgtggc
aacctttatgatgaaaccaagggcgtgcctccgggcagcaatgtcgagttgccggaagag
ggcagcggtaaggtcgccggcttgtttgtgcccataggtgtgctggtgctggcgacggtc
agctttatgatcggcagcggcgccatggcactggccgacgccggcctgcctttttccctg
attggtgcctttgagaaaacggatgtgggcgcatcgctgtttttcggagcgctgttgggg
ctcagcgccaccctggcactggtgctgtggcagggcatggctcctcggttggtcaagcgt
gcctcggtacaaggggcccgttccatggtcccggcgctgtatatcttgctgtttgcctgg
accatagcgggcatcataggagaactgggcacgggtaaatacatggccagtctggccggt
ggcaatctgccatttgccctgctgccggcgctgatgtttgtgctggccggcctgacggcg
ttcgccaccggcaccagctggggcacctttggcatcatgcttcccatagctgccgatatg
gccatgggcagtcacagtgccatgatgctgcccatgctggcttcggtgctggccggcgcc
gtgtttggcgatcactgttcacctatttccgacaccacgattttgtcctccaccggcgcc
agctgccatcacatagaccatgtgctgacccagctgccatatgcccttattgtcgccttc
atcagcctggtggggtatacggtgatgggtgtgaccgagtccgtgtgggccggtttcggt
gtcgcctccctgaccttcgtgttggcggtgctgtggctgaaacacaagtccggcgcccgc
gactga
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