Shewanella cyperi: JYB88_05630
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Entry
JYB88_05630 CDS
T07829
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
scyp
Shewanella cyperi
Pathway
scyp00280
Valine, leucine and isoleucine degradation
scyp00650
Butanoate metabolism
scyp00907
Pinene, camphor and geraniol degradation
scyp01100
Metabolic pathways
scyp01120
Microbial metabolism in diverse environments
scyp04146
Peroxisome
Module
scyp_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
JYB88_05630
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
JYB88_05630
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
JYB88_05630
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JYB88_05630
Enzymes [BR:
scyp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
JYB88_05630
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Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
QSX31122
UniProt:
A0A975AL69
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Position
complement(1337161..1338051)
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AA seq
296 aa
AA seq
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MAQPTSVSLFEVGPRDGLQNEQSVSTEAKIALVQDLAHAGIKRIEAASFVSPKWVPQMAD
SAEVLKGIQRLDGVRYSALTPNLKGLELALDASASEVAIFAAASEGFSQKNINCSIEESI
ERFIPLMEKAKAHNLPVRGYVSCVLGCPYDGEIAVSEVVRVSEILYKLGCYEISLGDTIG
VGTPLKARKMVEAVAAKVPVDQLALHFHDTYGQALANILACLETGVSVIDTSVAGLGGCP
YAKGASGNLASEDLVYMLHGMGIDTGVDLKRLAAAGNAISQALGKASGSKVARALG
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcccagccaaccagcgtcagcctgtttgaagtgggcccccgcgacggcctgcaaaat
gagcaaagtgtcagcaccgaggccaaaatagccttggtgcaggatctcgcccatgcaggt
atcaagcgtatcgaggccgccagcttcgtgtcccccaagtgggtgccacagatggcggat
tccgccgaggtgctgaagggcattcagaggttggacggggtgcgctacagcgccctcacc
cccaatctcaagggtctggaactggcgcttgacgccagcgcctccgaggtggctattttt
gctgccgcctccgagggcttcagccagaagaacatcaactgctccatagaggagtccatc
gagcgctttatcccgctgatggaaaaggcaaaagcgcacaatctgccggtgcgtggctat
gtgtcctgcgtgctcggttgcccctacgacggcgagattgccgtcagcgaagtggtgcgg
gtgtctgaaattctgtacaaattgggctgttacgaaatctccctcggtgacaccataggc
gttggcacgccgctgaaggcccgtaaaatggtcgaggccgtggccgccaaggtgccggtg
gaccagctggcgctgcatttccacgacacctatggtcaggcgctggcgaatattctcgcc
tgcctggaaaccggtgtcagcgtgattgatacctcggtggccggtctcggcggttgtccc
tatgccaagggcgcctcgggtaacctggccagcgaagatctggtctatatgctgcacggc
atgggcatagacaccggcgtagatctcaagcgtttggcggcggccggcaatgccatcagc
caggcgctgggcaaagccagcggctccaaggtcgcccgcgccttgggttaa
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