Shewanella cyperi: JYB88_05780
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Entry
JYB88_05780 CDS
T07829
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyp02000
]
JYB88_05780
Transporters [BR:
scyp02000
]
Other transporters
Pores ion channels [TC:
1
]
JYB88_05780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
Porin_2
Motif
Other DBs
NCBI-ProteinID:
QSX31798
UniProt:
A0A974XQY3
LinkDB
All DBs
Position
1371589..1373670
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AA seq
693 aa
AA seq
DB search
MACFPLAAQQMPADDKIERIIVSGSRVIESIDEIPASVTLIDRKTIEEQMLVNTQLQSIL
GLTVPGLSAATGTSSDSGQTLRGRQALIMIDGVPQSTPLRDGALGSRTLDPAAIERIEVI
KGATSIFGNGAAGGVINYITKRPGKGELQARVGASANMSLVKAEDTLGHRLEAAADGSLG
KFSYVVTLAREETGLQRDAEGDVIGLQYGLSDNKAQNLFTKLAYQFDGDKSLQASYSYYE
SQTDSDLVDVVGDVNTGIKTYAVKSSADNPLKGEPQGPRGNHNLMLKYTDEEIFSNTQLT
LDAYGQRIENVFFFSPVLANPDEGYDGGQSMIKSEKMGLRGLLNTQYQWQDVEATFIYGT
DLLNDVTSQPLLDGRMWVPEMDMSNRAFFLQTKWVIMDDFVIKAGIRDESIALEVDDYHT
LKLCRKADQCSVPMAVKGDTLDYSATTYNLGLRYTGNSLFSPFINYSQGADISDIGRLLR
TATVADIHDIRTEASIIDNYEVGFSSKLDALFFTFAAFRSTSELGTSNVFDEKTGVYMPV
RAPQKIWGYEATADYEVNDTLNLKAAYSWLEGKDTETDTYLDGKQISAPKFTAAVNWQPL
DNASLNLTYLLVGDRDRFDKVNGKWVGAQAPVHSYDLLNLSASYRLGQLKLFAGIENLLN
RDYYSARSQVYTYSSYNTKALGTSLNLGLQYQF
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcctgcttcccgctggcggcccaacaaatgccggctgacgacaagattgaacgcatc
atagtgtccggcagtcgggtgattgaaagcattgatgaaatcccggcatctgtaaccctt
atcgaccggaaaaccattgaagagcaaatgctggtcaatacccagctgcagagcatactc
ggcctcacagtgccgggactgtcggcggcgaccggcaccagcagtgattcggggcagacg
ctccgtggccggcaggcgctgatcatgattgacggcgtacctcagtcgaccccgctgcgt
gatggtgccctgggaagccgtacccttgatcccgccgccatcgagcgcatcgaggtgatt
aagggcgcgacctctattttcggcaacggcgccgcgggcggggtcatcaactacatcacc
aagcgccccggaaagggcgagctgcaagcccgggtgggcgcatcggccaacatgagcctg
gtcaaggccgaggacaccctggggcaccgcctggaggcggcggccgatggcagtcttgga
aaattcagctatgtggtgaccctggcccgggaagaaaccggactgcagcgcgatgccgag
ggggacgtcatcggcttgcaatacggtctgtccgacaacaaggcgcaaaacctgtttacc
aagctggcctatcagttcgatggcgacaagtcattgcaggccagttacagctactacgag
tcgcaaaccgattccgatctggtggatgtggtgggggatgtgaataccggcattaagacc
tatgcggtaaaaagcagtgccgacaacccgctgaagggggagccccaggggccccgtggc
aatcacaatctgatgctcaagtacacggatgaggagatcttcagcaacacccagctgacc
ctggatgcctatgggcaacgaattgaaaacgtgttctttttctccccggtattggcgaat
cccgatgagggttacgacggtggccagtcgatgatcaagtcggaaaaaatgggcctgcgg
ggtctgctcaacacccagtaccagtggcaggatgtggaagcgacctttatctatggtacg
gatctgctcaatgacgtcacctctcagccgctgctggacgggcgtatgtgggtgccggaa
atggacatgagcaaccgcgcctttttcctgcagaccaagtgggtgatcatggatgacttt
gttatcaaggccgggatccgcgacgagtcgatagcgctggaagtggatgactaccacacc
ctcaagctctgtcgtaaggcggatcaatgctcagtgcccatggcggtaaagggcgatacc
ctggactacagcgccaccacctataacctgggattgcgctacacaggcaacagcctgttc
tcgcctttcatcaactactcccagggtgccgacatctcggacattggccgcttgctacgc
acggcaacggtcgcggatattcacgatatccgtaccgaggcctccatcatagacaactat
gaagtgggcttcagcagcaagctggatgcgctgttcttcacctttgccgccttcagaagc
acgtcggagctgggcaccagcaatgtgttcgacgagaaaaccggggtttatatgccggtg
cgggcgccgcagaagatttggggctatgaggccacggccgattatgaggttaacgacacc
ctgaacctcaaggccgcctacagctggctcgagggcaaggacacagaaaccgacacctat
ctggatggcaaacagatcagtgcccccaaattcaccgccgcggtcaactggcagcccctg
gacaatgccagtttaaacctgacctatctgctggtgggtgacagagaccgctttgacaag
gtcaatggcaaatgggtcggcgcccaggcgccggtgcacagttatgacctgttgaatttg
agcgccagctatcgtctggggcagttgaagctgtttgccggtatcgaaaacctgcttaac
cgcgattactacagcgcgcgctcgcaggtctacacctacagcagctacaacaccaaggca
ctggggaccagtctcaatctcgggctgcagtaccagttttaa
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