Shewanella cyperi: JYB88_06300
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Entry
JYB88_06300 CDS
T07829
Name
(GenBank) ABC transporter substrate-binding protein
KO
K19226
cationic peptide transport system substrate-binding protein
Organism
scyp
Shewanella cyperi
Pathway
scyp01503
Cationic antimicrobial peptide (CAMP) resistance
scyp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JYB88_06300
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
JYB88_06300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyp02000
]
JYB88_06300
Transporters [BR:
scyp02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Cationic peptide transporter
JYB88_06300
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QSX31240
UniProt:
A0A974XMP7
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All DBs
Position
complement(1493756..1495390)
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AA seq
544 aa
AA seq
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MNALTIRLCRTAGILLMGCWLSACGPQQLPPGLVYCSEGNPESFNPQLVTSGTTIDATSH
QLYNRLVDYDDDSGKIVPGLAKAWHVSADGLSYRFELRKGVNFHSSKIFTPSRTLNADDV
LFSFHRILDEDHPYHYVSRSGYPFFQSIDFADLVTSVTKLDDYRIEFHLSRPDASFLANL
ATDFAVILSREYAMQLLRAGTPEKLDQLAIGTGPFRLVEYVKNEYIRYRRHEGYWGKIPE
IEMLVFDITSKSTVRLSKLITGDCSVSALPKAGELTRVSEHPQLVLDETAGLNVAFWAFN
TQKQPFNDVRVRRALSHAIDKQNILRAVYQNSAIEAKGILPPTSWAYNSDAGAGLEFSPE
KARQLLTEAGIDKLTIDIWAMPVARAYNPNALKTAELIQADLAKIGVKVNIISYDWSVFS
QKLSHSDYDSVLIGWNADNSDPDNFFTPLLSCASVESGSNRSRWCNTEFDAMVRAAKAIN
DIRARTALYHEAEAMLAEQAPMMSFAHAKRMLLKSDQITGMHLSAFGGISFDRISIKSDK
EQAH
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgctgacaatcaggctctgcagaaccgccggaatcttgctgatgggatgctgg
ctctctgcctgcggcccgcagcaactgcctcccgggttggtttattgctccgagggcaac
cccgagtcctttaacccccagttggtaacttcgggcaccaccatagatgccacctcacac
cagctctacaaccgcctggtggattacgacgatgacagcggtaaaattgtccccggtttg
gccaaagcctggcacgtcagtgctgatggtctgagctaccgctttgagttgcgtaaaggc
gtcaattttcacagttcgaagatcttcaccccaagccggacactcaatgctgacgatgtg
ctgttttccttccatcgtattctggatgaggatcatccctaccattatgtgtcccgcagt
ggctatcccttctttcagagtatcgactttgccgacctggtaacctctgtgaccaagctg
gatgattaccgcattgagtttcatctgtcgcggcccgatgcttccttcctggccaatctt
gccaccgatttcgcggtaattttgtcccgggaatacgcgatgcaattgttgcgggccgga
acaccggaaaaactcgaccagttggccataggcacaggccccttccgcctggtggaatat
gtcaaaaacgagtacatccgctaccgccgtcatgaggggtactggggcaaaatacctgag
atagaaatgctggtatttgatatcacttcaaagagcactgtgcgtttatcaaaactgatt
accggggattgcagcgtatcagccctgccaaaggctggtgaactgacacgggtaagtgaa
caccctcaattagtgctggatgaaactgcgggtttgaacgtagccttttgggcattcaat
actcaaaagcagccttttaatgatgtcagagtccgccgggccctgtcccacgccatagac
aaacaaaacattttgcgggccgtgtatcagaacagtgccatcgaggccaaaggtattttg
ccccccacttcctgggcctataacagtgacgccggggctggtcttgagttttctccggaa
aaagcccggcaactgctgaccgaggcaggcatagataaactgaccattgatatttgggcc
atgccggtagcaagggcgtataaccccaatgccctgaaaaccgccgagcttattcaggcg
gatcttgccaagattggggtcaaggtgaatatcatcagttacgactggagtgtgttctcc
caaaagctgtcacacagcgactatgactcggtgctcatcggttggaacgcagacaacagc
gatccggacaatttcttcacccctttgctcagttgcgcctcggtggaatccggcagcaac
agatcacgttggtgcaataccgaatttgatgccatggtacgcgccgccaaagccatcaat
gacattcgtgcccgcacagccctttaccacgaggccgaggccatgttggccgagcaggct
cctatgatgagctttgcccacgccaaacgcatgttgctgaagagcgatcaaattaccggt
atgcacctgagtgcctttggtggcatttcctttgacaggatcagtataaaatccgacaag
gagcaagcacactga
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