Shewanella cyperi: JYB88_06785
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Entry
JYB88_06785 CDS
T07829
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
scyp
Shewanella cyperi
Pathway
scyp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JYB88_06785 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyp02000
]
JYB88_06785 (msbA)
Enzymes [BR:
scyp01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
JYB88_06785 (msbA)
Transporters [BR:
scyp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JYB88_06785 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_22
ABC_ATPase
AAA_29
AAA_16
RsgA_GTPase
nSTAND3
PlyCA_N
Motif
Other DBs
NCBI-ProteinID:
QSX31333
UniProt:
A0A974XQ21
LinkDB
All DBs
Position
1598697..1600505
Genome browser
AA seq
602 aa
AA seq
DB search
MTTSAKNEVWVVFRRLLGYLKPMKSIFVMSLLGLITYGAVDTLFIAFIQPFIDKGFNGST
PQVQGMGLAMEANKGFGSGSDVLLMAPFVVVGMFTLRGLANFVSTYGISYMSARLIMDLR
QQVFNHYLTLPVSYMDRENAGNLISRVTFDTEQIARASGSALISIVRDSITVIGMLVLMF
YSSWKLSLCIIVVGPIIGWVIATVSRRFRKVSKQIQTAMGGVTATTEQMVKGHKNVLAFG
GQETERQRFAKVNDQNRHQNMKLAVAQAISQPVIMIIGSFALAFVIYAASLDSLKHELTA
GTFAAVLAAMLAMLQPIKNLTRVNAEFQRGIAACTTVFELLDTPSESDKGSYQIERVKGK
LTFDKVKFRYEGQERLALDDISFEVQPGRTLALVGRSGSGKSTIASLVSRFYSGLEQGDI
LLDDVSIYDYQLANLRSQVALVSQQVTLFNDSIANNIAYAYPGEVSRGQIEQAATLAHAM
EFIKDLPQGLDTQVGENGVLLSGGQRQRIAIARAILRNAPVLILDEATSALDTESEKAIQ
QGLDNLRHNRTSVVIAHRLSTIESADEILVVDQGRVVERGNHAELLAKDGMYAKLYQMQF
SG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatctgccaagaatgaagtatgggtggttttccggcgtctgctgggctatctc
aagccgatgaaatccatctttgtaatgtcgctacttggactcattacctatggcgcagta
gacaccctgtttatcgccttcattcaacctttcatcgacaaaggttttaatggatccact
ccccaggttcagggcatgggcctggccatggaagcaaacaagggctttggctcaggttca
gacgtgttgctgatggcgccgttcgtggtggtgggtatgtttaccctgcgcggtttggcc
aactttgtctccacctatggcatttcctatatgagtgccagactcattatggatttgcgc
cagcaggtatttaatcactacctgaccttgcccgtgagctacatggacagggaaaatgcc
ggtaacctgatttcccgggtcacctttgataccgagcagattgccagggcctccggcagt
gcgttgatctccattgtccgtgacagcattaccgtcataggtatgctggtgctgatgttc
tattcctcctggaagctgtccctgtgcattattgtggtaggccccatcataggttgggtg
atagcgaccgtgagccgccgtttccgcaaggtgtccaaacaaatccaaaccgccatgggc
ggtgtgacggcgacgaccgagcagatggtcaaggggcataaaaacgtgctcgcctttggc
ggccaggagacggagcgacaaaggtttgctaaggtcaacgatcaaaaccgccatcagaat
atgaagctggcggtggcccaggccatcagccaacctgtcatcatgatcataggctctttc
gccctggcctttgtgatctacgccgccagtctcgacagtctcaagcatgagctgaccgcg
ggtacctttgccgcggtattggcggccatgttggccatgttgcaacccatcaagaacctg
acccgggtcaatgctgaattccagcgcggtatcgccgcctgtaccacggtttttgagctg
ctcgacactccatctgagagcgacaagggcagctatcaaattgaaagggttaagggcaag
ctgaccttcgacaaggtgaaattccgctatgaaggccaggagcgcctggcgctggatgac
atcagctttgaagtgcagcctggccgaactctggcgctggtggggcgctccggttcaggt
aagtccaccatcgccagcctggtgagtcgcttctattcggggcttgagcagggcgatatc
ctgcttgatgatgtcagcatctacgactatcaactggcgaacctgcgcagtcaggtggcg
ctggtgtcccagcaggttaccctgttcaacgacagtatcgccaataacatagcctatgcc
tatccgggtgaagtctcccgcgggcagattgagcaggcggccaccctggcacacgccatg
gagttcatcaaagacttaccccaaggtctggatacccaggtgggggaaaacggtgtgctg
ctttccggtggccaacgtcagcgtatcgccattgcccgcgccatcctgcgcaatgcaccc
gtgcttatcctcgacgaggcgacctcggcgctggataccgagtccgagaaggcgatacag
caggggctggacaatttgcgtcacaatcgcacctctgtggtgatagcccacaggctgtca
accatagaaagcgccgatgaaattctggtggtggatcagggcagggtggtagagcgcggc
aaccatgccgagctgctggccaaagatggcatgtacgccaagttgtaccaaatgcagttc
agtggctga
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