Shewanella cyperi: JYB88_06855
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Entry
JYB88_06855 CDS
T07829
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
scyp
Shewanella cyperi
Pathway
scyp00020
Citrate cycle (TCA cycle)
scyp00190
Oxidative phosphorylation
scyp00650
Butanoate metabolism
scyp00720
Other carbon fixation pathways
scyp01100
Metabolic pathways
scyp01110
Biosynthesis of secondary metabolites
scyp01120
Microbial metabolism in diverse environments
scyp01200
Carbon metabolism
Module
scyp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
scyp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
scyp_M00149
Succinate dehydrogenase, prokaryotes
scyp_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JYB88_06855 (sdhA)
00650 Butanoate metabolism
JYB88_06855 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
JYB88_06855 (sdhA)
00720 Other carbon fixation pathways
JYB88_06855 (sdhA)
Enzymes [BR:
scyp01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
JYB88_06855 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
GIDA
Pyr_redox_2
FAD_binding_3
Thi4
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
QSX31347
UniProt:
A0A975ALD9
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All DBs
Position
1619545..1621311
Genome browser
AA seq
588 aa
AA seq
DB search
MSIPVREFDAVVIGAGGAGMRAALQISKEGKSCALLSKVFPTRSHTVSAQGGITVALGNA
HEDNWEFHMYDTVKGSDFIGDQDAIEYMCQTGPEAIIELEHMGLPFSRFENGKIYQRPFG
GQSRDFGGEQAARTAAAADRTGHALLHCLYQQNVKNKTQVFSEWYALDLVKNEDGAIVGC
TAIDIESGEIVYFKAKATVLATGGAGRIFASTTNAHINTGDGVGMAVRAGVQLQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLASRDVVARSMMTEIREG
RGCDGPMGPHIKLKLDHLGKETLEARLPGVCELSRTFAHIDPADGPIPVIPTCHYMMGGL
PTKVSGQVIRKNEDGSEQDVVGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGQHLG
KALDETADPKAASNADIQKSLERLNRWESNKDGEDPAQIRKDLQMCMQLNFSVFRSGDAM
AEGLEQLKQIRERLANAKLSDNSKEFNTQRIECLELDNLMATAIASAYAANFRTESRGAH
SREDFPERDDDNWLCHSLFDPVTETMSTREVNMSPKSREAFPPKKRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgagtattccagttcgcgaatttgacgcagtggtgattggtgccggtggtgccggtatg
cgcgctgcgctgcagatttccaaagaaggcaagagctgtgcgctcctgtccaaagtattc
ccaacccgttctcacactgtatctgcccaaggcggtatcacagtagccctgggtaacgcc
cacgaggataactgggaatttcacatgtacgacacggtaaaaggttccgattttatcggt
gaccaggacgccattgagtacatgtgtcagaccggtccagaagccattatcgagctggaa
cacatgggtctgccattctcccgcttcgaaaacggcaagatctatcagcgtccattcggt
ggccaatcaagagatttcggtggcgaacaggccgcccgtaccgcggccgcggccgaccgt
accggccacgcgctgctgcactgcctgtaccagcaaaacgttaagaacaagacccaggtg
ttctctgagtggtatgccctggatctggtgaagaacgaagacggtgccatcgttggctgt
actgccatcgacatcgaaagcggtgaaatcgtgtacttcaaggccaaggcaactgtgctc
gccactggcggtgccggtcgtatctttgcctctaccaccaacgcccatatcaacaccggt
gacggcgtgggtatggctgtccgtgccggcgtacagctgcaggacatggaaatgtggcag
ttccaccccacaggtattgccggtgccggcgtactggtgaccgaaggttgccgcggtgag
ggcggatacctgctgaacaaggacggcgagcgtttcatggagcgctatgcgcccaacgcc
aaagacctggcgtcccgtgacgtggttgcccgttccatgatgaccgaaatccgtgaaggt
cgtggttgtgacggcccaatgggtccgcacatcaagctgaagctggaccacctgggtaaa
gaaaccctggaagcccgtctgccaggcgtgtgtgaactgtcccgtacctttgctcacatc
gatccggcagatggcccaatccctgtgatcccaacctgtcactatatgatgggtggtctg
ccgaccaaggtttccggtcaggttatccgcaagaatgaagatggcagcgagcaggacgta
gtaggtctgtttgccgtgggcgaaatcgcctgcgtatccgtacacggtgccaaccgtctg
ggcggcaactccctgcttgacctggtggtattcggtcgtgcggctggtcaacatctgggc
aaggccctggatgagactgccgatccgaaggcggcttccaacgccgacatccagaagtct
ctggagcgtctgaatcgttgggaaagcaacaaagacggtgaagacccagcgcaaatccgt
aaagatctgcagatgtgcatgcagctgaacttctcggtattccgcagcggtgacgccatg
gccgaaggcctggaacagctgaagcagatccgtgagcgtttggccaatgccaagctgtcc
gataactccaaagagttcaacacccagcgcatcgagtgtctggaactggacaacctgatg
gccaccgccatcgcctccgcttatgctgcgaacttccgtaccgagagccgtggtgctcac
agccgtgaagacttccctgagcgtgacgatgacaactggttgtgccacagcctgttcgat
cccgtgaccgaaaccatgtccacccgtgaagtgaacatgtcgcccaagtcacgcgaagcc
ttcccaccgaagaagcgtacctactaa
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