Shewanella cyperi: JYB88_07530
Help
Entry
JYB88_07530 CDS
T07829
Name
(GenBank) marine proteobacterial sortase target protein
KO
K07114
Ca-activated chloride channel homolog
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyp02000
]
JYB88_07530
Transporters [BR:
scyp02000
]
Other transporters
Pores ion channels [TC:
1
]
JYB88_07530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIT
VWA_3
VWA_2
VWA
VIT_2
VWA_CoxE
DUF2201
VWA_4
vWA-TerF-like
Motif
Other DBs
NCBI-ProteinID:
QSX31458
UniProt:
A0A975AMM1
LinkDB
All DBs
Position
1757353..1759395
Genome browser
AA seq
680 aa
AA seq
DB search
MNSTRYQGLSRWVAAVTLICSAGAGATGNGADWQQEAGKAWVHTEAAEPGMGLLQYRDSQ
GQKRQLIAVNTRVQMHVSGWLNRVVLEQEFLNLTGETIQGQYQFPLPQGAAVDGMELDLG
QRKIVGEIQEKQAARARFEQAKQQGQRAALLEHRSANLFHTEVANLMPGALLKVRVNYLQ
TLNWEQQGFELRFPMTLTPRYLSPLLPMAQGQVPMSASAMPRQARVSLELLLEGFDIRAV
TSPYHQIQVEREAEDRTRVRLEDWAANRDFVLRWQPGLEQAPKASVQVQQGLSYGGEEQG
YFHGLLSLLPPATELALAVPRELVLVIDTSGSMTGESLSQAKAALAEALNQLTPADSFNL
IAFNSDVTMLWPQSRPWSAQNLKTAMKFVRSLEAEGGTEMAAALNAALPSNASGERVRQV
IFITDGAVGQEQALFTQIEEQLGDSRLFTVGIGAAPNGFFMERAAQAGKGSFTYIGKAAE
VSERMQALLERIAKPRLSHIRVQFEDGTIPEHWPAAIPDLYAETPLQLSFRLPAASHGDL
MVSGRIGAKPWQVQLPLIPVASQRGLDLAFGQAQISALERARSAANGERTRQQITALGLK
YHLMSPYTSLVAVDQEAVNQGQPGPLVQLATPLPAHWQGGMPQTALGSALWLLLGSVCLL
LALVFECLGRLGRLRLASAP
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaacacgatatcagggcctgagcagatgggtggcggccgtcaccctcatctgc
agcgcaggcgcgggcgccacgggtaacggcgcggattggcaacaagaggcgggtaaggcc
tgggttcacacagaggcggccgaacccgggatgggattgctgcaataccgggacagccag
gggcagaaaaggcagctaattgcggttaacacccgggtgcagatgcacgtcagtggctgg
ctgaaccgggtagtgctggagcaggagtttcttaacctgaccggcgagaccattcagggg
cagtatcagtttcccctgccccagggcgcggcggtggatggcatggaactggatctggga
cagcgcaagatagtcggtgagatccaggaaaaacaggccgcgagggccagatttgaacag
gccaaacagcagggccagcgggcggcgctgctggaacacagaagtgccaatctgtttcac
actgaagtggccaacctgatgccgggcgccttgctgaaggtgcgagttaattacctgcag
accctcaactgggagcagcagggatttgaattgcgctttcccatgaccctgacgccaagg
tacttaagccccctgttgccaatggcccagggccaggtgcccatgtcggcttcggccatg
ccaaggcaagccagggtcagtttggaactgctgctggagggctttgatattcgcgctgtg
accagcccctatcatcaaattcaggtggagcgggaagcagaggatcgtacccgggtgcgc
ctggaagactgggcggccaaccgtgattttgtgctgcgctggcagccaggtctggaacag
gcgcccaaggcctcggtgcaggtgcagcagggcctgagctatggcggggaagagcagggc
tacttccatggtttactttccttgctgccgccggccaccgagttggcgctggctgtgcct
agggagttggtgctggtgatagatacctcgggctcaatgacaggggaatccctgagccag
gccaaggcagccttggccgaggcactgaatcaattgacacccgctgacagctttaacctg
attgcctttaactcggatgtgaccatgttgtggccacaatcacgcccctggagtgcccag
aatctcaaaacggcgatgaagtttgtccgctccctggaagcagagggcggcacggaaatg
gcggcggctctgaatgcggccttgccatccaatgccagcggggaacgcgtgcgccaggtg
atcttcatcaccgacggtgccgttggtcaggaacaggccttgtttacccagattgaggag
caattgggggacagccggctgtttactgtcggaataggggcggcgccaaacggctttttt
atggagcgggcggctcaggcgggcaagggcagtttcacttacataggcaaggcggccgag
gtcagcgaacgcatgcaggcactgcttgaacgcattgccaagcccagactcagccatatc
cgggtgcagtttgaagacggcaccattcccgagcactggcccgctgccattccggatctc
tatgccgaaacgcctttgcagctgagtttccgccttcccgccgccagccatggcgacctt
atggtcagcggccgaattggggcaaagccctggcaggtgcaactgcctttgataccggtc
gcgagccaaagagggctggatctggcctttggtcaggcacagatctccgccctggaacgg
gcccgcagtgccgccaatggcgagcgcacccggcaacagatcacggctctggggctcaaa
tatcacctgatgagcccctacaccagtctggtggccgtcgaccaggaagccgtgaatcag
ggacaaccgggccctctggtgcagttggcgacacccttacccgcccattggcagggaggc
atgccgcagaccgcccttggcagtgcactttggttgttgcttggcagcgtgtgtctgttg
ctggcgctggtttttgaatgtcttggcaggctggggcgtttgagattggcgtcggcacca
tga
DBGET
integrated database retrieval system
