Shewanella cyperi: JYB88_07750
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Entry
JYB88_07750 CDS
T07829
Symbol
speA
Name
(GenBank) biosynthetic arginine decarboxylase
KO
K01585
arginine decarboxylase [EC:
4.1.1.19
]
Organism
scyp
Shewanella cyperi
Pathway
scyp00330
Arginine and proline metabolism
scyp01100
Metabolic pathways
scyp01110
Biosynthesis of secondary metabolites
Module
scyp_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
JYB88_07750 (speA)
Enzymes [BR:
scyp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
JYB88_07750 (speA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Arg_decarb_HB
Arg_decarbox_C
Motif
Other DBs
NCBI-ProteinID:
QSX31499
UniProt:
A0A974XNA7
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All DBs
Position
1801331..1803241
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AA seq
636 aa
AA seq
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MNDWSIDDARAGYNVAHWSQGFYGISDQGEVTVSPDPKNPEFKIGLNELAKDMVKAGVNM
PVLVRFPQILHHRVDSLCQAFNQAIQKYEYQADYLLVYPIKVNQQQTVVEEILASQVSKE
APQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDNEYIRLALIGEKLGHKVYIVLEKMS
ELKMVLTESKKLGVTPRLGLRARLAFQGKGKWQASGGEKSKFGLSAAQILSVIDQLKAEN
MLDSLQLLHFHLGSQIANIRDIRQGVGEAARFYCELRQLGAKVNCFDVGGGLAVDYDGTR
SQSNNSMNYALAEYANNIVSVLTDTCNEYEQPMPRIISESGRYLTAHHAVLITDVIGTET
YSPELIIEPAEDAPQLLHNMWQSWTEISGRLDQRALIEIFHDTQSDLAEAHSLFAMGQLS
LADRAWAEQCNLRVCHELQGLMSTKNRYQRPIIDELNEKLADKFFVNFSLFQSLPDAWGI
DQVFPVLPLSGLDKVPERRAVMLDITCDSDGIVDQYVDGQGIETTLPVPTWSAESPYLIG
FFLVGAYQEILGDMHNLFGDTNSAVVRIDEQGLTNIESVLAGDTVADVLRYVNLDAVSFM
RTYEELVNQHIDESERALILEELQVGLKGYTYLEDF
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaacgattggtctattgatgatgctcgtgccgggtacaacgttgcccactggagccag
gggttttacgggatcagcgatcagggcgaggtaacagtatcgccggatcctaaaaatcct
gagtttaagatcggtcttaacgagttggccaaagacatggtcaaggccggtgtaaacatg
ccagtgctggtgcgtttcccgcagatcctgcaccacagggtcgatagcctgtgtcaggcc
ttcaaccaagccattcagaagtacgagtatcaggccgattacctgctggtataccccatc
aaggtgaaccagcagcagacagtggtggaagaaattctcgccagccaggtcagcaaagaa
gccccacaactgggtctggaagccggcagtaagcccgaattgatggccgtgttggccatg
gcccaaaaagccagctcagtgattgtctgtaacggctacaaagacaatgaatacatccgc
ctggcactgattggtgaaaagctcggccacaaggtgtacatagtgctggagaaaatgtca
gaactgaaaatggttctgaccgaatccaaaaagctgggtgtaactccacgcctgggtctg
cgtgcccgtctggcattccaggggaaaggcaagtggcaggccagtggtggtgaaaagtcc
aagtttggcctgtcggcagcacagatcctaagtgttatcgaccagctcaaggccgagaac
atgctggattcgctgcagttgctgcatttccatctgggctcgcaaattgccaacatccgc
gatatccgtcagggcgtcggtgaagcagcgcgtttctactgcgaactgcgtcagctgggt
gccaaggttaactgtttcgacgtcggcggtggtttggccgtggactatgacggtacccgc
agccagtcgaacaactcaatgaactatgccctggccgaatacgccaacaacatagtctct
gtgttgaccgatacctgtaacgagtatgagcagccgatgccgcggatcatatctgaatcc
ggccgctatctgactgcgcaccatgccgtgttgatcaccgatgtgattggcaccgagacc
tacagtcctgagctgatcattgaacctgccgaagatgcgccccagctgctgcacaacatg
tggcagagttggaccgaaatcagtggccgtttggatcagcgtgcgcttatcgagattttc
cacgacacccagtcggatctggccgaagcccactcgctgtttgccatgggacaactgagc
ctggccgaccgtgcctgggccgagcagtgcaacctgcgtgtttgtcacgagctgcagggg
ctgatgagcaccaagaaccgttaccagcgcccgatcattgacgaactcaatgaaaagctg
gcggacaagttcttcgtgaacttctccctgttccagtcgctgccagacgcctggggtata
gatcaggtgttccccgtgttgcccctgtccggtttggacaaggtaccggagcgccgcgcg
gtcatgctggacattacctgcgactcggacggtattgtcgatcaatacgtggacggtcag
ggtatcgaaaccacgctgccagtaccgacctggagtgctgagagtccatatctcatcggt
ttcttcctggtgggcgcctatcaggagatcctcggcgacatgcacaacctgtttggtgac
accaactccgccgtggtgcgcattgacgagcagggcctgaccaatattgagtcagtgctg
gccggtgataccgttgccgatgtgctgcgttatgtgaacctggacgccgtgtctttcatg
cgcacctatgaagagctggtgaaccagcacatagatgagagtgaaagggcgcttatcctc
gaagagttgcaagtgggccttaagggttacacttacttggaagacttttaa
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