Shewanella cyperi: JYB88_08295
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Entry
JYB88_08295 CDS
T07829
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
scyp
Shewanella cyperi
Pathway
scyp00730
Thiamine metabolism
scyp01100
Metabolic pathways
scyp01240
Biosynthesis of cofactors
Module
scyp_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
JYB88_08295 (thiC)
Enzymes [BR:
scyp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
JYB88_08295 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QSX31601
UniProt:
A0A974XQT9
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All DBs
Position
1920847..1922847
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AA seq
666 aa
AA seq
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MSNRRETRAAAQAFIENLKPLAHPNSEKIYLQGSRADIRVGMRQIHQTDTRIAAADGSIR
LEPNPAIRVYDCAGAYSDPAANINVRRGLAALRSPWILERDDTEVLEGVSSQFTQQRLAD
EGLDHLRFDALPKPRRAKAGKRVTQLHYARAGIITPEMEYIAIRENLARAADTSGDGWDE
QLTRRKPGEAFGALVGQPITAEFVRDEVARGRAIIPANINHPEAEPMIIGRNFLVKVNAN
IGNSAVTSSIEEEVEKLVWATRWGADTVMDLSTGRYIHETREWIVRNSPVPIGTVPIYQA
LEKVNGIAEDLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIM
AKWCLSHHKENFLYTHFRDICELCAAYDVSLSLGDGMRPGSIADANDEAQFAELETLGEL
VKIAWEYDVQTIIEGPGHIPMQLIKENMDKQLEHCAEAPFYTLGPQTTDIAPGYDHFTSG
IGAAMIAWYGCAMLCYVTPKEHLGLPNKEDVKQGLIAYKIAAHAADVAKGHPSAQLRDNA
LSKARFEFRWEDQYNLGLDPDTARAYHDESLPQESAKVAHFCSMCGPKFCSMKITQDVRD
YAAGLEAAKAAGANDTAQAIEVQAIAVQHSIARDGMAKMSGAFRDAGGALYSEHHVDGVL
EPISGE
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaccgtcgtgaaacccgtgccgccgcccaggcctttattgaaaacctcaagccg
ctggcccatcccaattcagaaaaaatctacctgcagggctcccgtgccgatatccgggtt
ggtatgcggcagatccaccagactgatacccgcattgccgccgcagatggcagtattcgt
ttggagcccaacccggcaatccgggtttatgattgtgccggcgcctacagcgatccggcc
gccaacatcaatgtccgccggggattggctgcactgcgcagcccctggatcctggaacgg
gatgataccgaggtccttgaaggtgtcagctcccaattcacccagcaacgccttgccgat
gaaggactggatcacctgcgcttcgatgcgctgcccaaaccgcgccgcgccaaggccggt
aagagggtgacccagctgcattatgccagggcggggatcatcacccccgaaatggaatac
atagccattcgggaaaacctggcccgggccgctgacacaagcggcgacgggtgggatgag
cagctcacgcgacgcaagcccggtgaagccttcggtgccctggtggggcagcccattacg
gccgagtttgtccgtgacgaagtggcccgtggccgcgccatcatccccgccaatatcaat
caccccgaggcagagccgatgatcatcggccgtaatttcctggtgaaggtcaatgccaac
ataggcaactctgcggtgacctcatccatcgaggaagaggtggaaaaactggtgtgggcc
acccgctggggcgcagatacagtgatggacttgtccaccggtcgctacatccacgagacc
cgcgaatggatagtgcgcaactcgcccgtgccgataggcacagtgcccatctaccaggcg
ctggagaaggtaaacggcatagccgaagatctcagctgggaagtgttccgcgataccctg
attgagcaggccgagcagggggtggattacttcaccatccacgccggtgtgctgctgcgt
tacgtgcccatgaccgccaagcgggtgacaggcatagtctcccgcggcggctccatcatg
gccaagtggtgcctgagtcaccacaaggagaacttcctctacacccatttccgcgacatc
tgtgagctttgcgccgcctacgacgtgtccctgtccctgggggacggcatgcgtcccggt
tcaatcgccgatgccaacgacgaggcccagtttgccgagctggaaaccctgggggaactg
gtgaaaattgcctgggaatacgatgtgcagaccatcattgaaggtcccggccatatcccc
atgcagctcatcaaagagaacatggacaagcagctggagcactgcgccgaagcgccgttt
tataccctgggcccccagaccacagacatagccccgggctacgatcatttcacctccggc
ataggggcggcgatgatagcctggtacggctgcgccatgctctgttacgtgacacccaag
gaacatctcggcttgccgaacaaagaagacgtcaagcagggcctaatcgcctataagatt
gccgcccacgccgctgacgtggccaagggccatccaagcgcccagttgcgggacaatgcc
ctgtcgaaggcccgttttgagttccgctgggaagatcagtacaacctggggcttgatccc
gacacggcccgggcctatcacgatgagtcactgccccaggagtcggccaaggtggcccat
ttctgctccatgtgcggtcccaagttctgttcgatgaagatcacccaggacgtgcgtgac
tacgccgccggcttggaagcggccaaggctgcaggagcaaatgacacagcccaggccatc
gaagtgcaagccatagctgtgcagcacagtattgcccgggacggcatggcgaaaatgtcc
ggtgccttccgtgatgccggtggtgccctgtacagcgagcatcatgtggatggggtgctt
gaacccatttcaggggaatag
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