Shewanella cyperi: JYB88_08670
Help
Entry
JYB88_08670 CDS
T07829
Name
(GenBank) FNR family transcription factor
KO
K01420
CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scyp03000
]
JYB88_08670
Transcription factors [BR:
scyp03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
JYB88_08670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
Crp
cNMP_binding
MarR_2
DUF6917
RXLR_WY
MarR
Motif
Other DBs
NCBI-ProteinID:
QSX31661
UniProt:
A0A974XQY0
LinkDB
All DBs
Position
complement(1996964..1997710)
Genome browser
AA seq
248 aa
AA seq
DB search
MDQTKGRRPANAGCTIHCHDCSMGTLCIPFTLNTNELDQLDNIIERKKPIQKGEQIFQSG
DSLKSLYAIRSGTVKSYTITEQGDEQITGFHLAGDVIGFDGIHGQSHQSFAQALETSMVC
EIPFNTLDELSGTMPKLRQQIMRLMSNEIMSDQEMILLLSKKNAEERLAAFISNLARRYG
NRGFSAREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGLIEVKGKYITILDAAGLNQL
AGTARIAR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaacaaaaggccgtcgccccgcaaacgcaggttgcaccatacattgtcacgac
tgcagcatgggaactctgtgtattccatttacgttgaataccaacgagttggatcagttg
gacaacatcattgaacgcaaaaagcccattcaaaagggtgagcaaatttttcagtccggt
gattccctgaaatctttgtatgccattcgctccggaaccgtgaagagttacaccatcaca
gagcaaggtgatgagcaaatcaccggctttcacctcgccggtgacgtcataggttttgac
gggatccatggtcaaagccaccaaagctttgcacaggctctggaaacctccatggtatgc
gagatccccttcaataccctggatgaactgtccggcaccatgcccaagttgcgccagcaa
atcatgcgcctgatgagcaatgaaatcatgagcgatcaggagatgatcctgctgctcagc
aagaagaatgccgaggaacgactggcggcttttatcagtaatctggcccgtcgctacggt
aatcgtggtttctccgcccgggaattcaggctcaccatgacccgcggtgatataggcaac
tatctgggactgacggtcgaaaccatcagccgtttgctggggcgcttccagaagtcaggt
ttaattgaggtgaaaggtaaatacatcaccatattagacgctgccggcctcaatcaactg
gctggcaccgccagaattgccaggtga
DBGET
integrated database retrieval system