Shewanella cyperi: JYB88_09350
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Entry
JYB88_09350 CDS
T07829
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scyp03009
]
JYB88_09350
Enzymes [BR:
scyp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
JYB88_09350
Ribosome biogenesis [BR:
scyp03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
JYB88_09350
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltransf_31
Ubie_methyltran
Methyltransf_25
Methyltransf_4
FtsJ
MTS
GCD14
PCMT
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
QSX31854
UniProt:
A0A974XWY9
LinkDB
All DBs
Position
complement(2144392..2145606)
Genome browser
AA seq
404 aa
AA seq
DB search
MMLSPLSASSCELVLGVLNQVLIEGAPLDRAYSKHFSGLQLAPAEQARIALVTGDLLRRL
NLFCYLADIEPARVEREGSRLINAWHLFHELPLPKMKYALPVDAAEFAGRLTQARNQGPL
WDGCPAWLDTLGQAELGEAWPAERAALALAPKRYLRSNGLKCDPQALMARLKGEGVDTQP
VAGVPSALEVTSDAALFRTQSFADGWFEQQDAGSQLVADALDVAPGMRVIDACAGAGGKT
LHLAAKMQGRGRLLAMDVEQWKLDNLKQRARRAGAHNVETRLIAGSKTIKRLKLSADRLL
LDVPCSGLGVLKRNPDAKWRDTEERLPVLMELQEHILGSYSRMLKVGGILVYATCSILPS
ENRRQVDKFLAAQSNFRLLDDECITPANQGFDGFYLARIERIAE
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
attatgttatctcccttgtctgcgtcttcctgcgaattggtgctcggtgtcctcaatcag
gttttgattgaaggtgcgcccctggacagagcctattcaaaacacttctcaggactgcaa
ctggcacctgccgagcaggccaggatagctctggtcacgggggatctgctgcggcgtctg
aatctgttttgctatctggccgacatagagccggcaagggtggagcgtgaaggttcgcgg
cttatcaatgcctggcatctgttccatgaattgccactgccgaaaatgaagtacgccttg
ccggtggatgcggccgaattcgcaggtcgtctgacacaggcccgcaaccaaggtccactg
tgggacggttgtcccgcctggttggataccctgggccaagcggagctgggcgaggcctgg
ccggcagagcgcgcggcactggcgctggcacccaagcgctatctgcgcagcaacggtctc
aagtgcgatccgcaggcgctgatggcccgtctcaagggcgaaggcgttgatacccagccg
gtggccggtgtgccctcggcgctggaagtgacctcggatgcggcgctgtttcgcacccag
agtttcgccgatggttggtttgagcagcaggatgctggttcgcagctggtggccgatgcc
ctggatgtggcgcccggcatgcgggtgatcgatgcctgtgccggagccggcggcaagacc
ctgcatctggctgccaagatgcagggccgtggtcgtctgctggccatggatgtggagcaa
tggaagctggataacctgaagcagcgtgcccgccgcgccggtgcccacaatgttgaaacc
cgcctcattgccggcagcaagaccatcaagcgcctcaagctgtccgccgatcggctgctg
ctcgatgtaccctgttctggccttggggtactcaaacgtaaccccgatgccaagtggcga
gacaccgaagagcgtttacctgtgctgatggagttgcaggaacatattctcggcagctac
agccggatgttgaaggtcggcggcatactggtttacgcaacctgctcgatactgccatcc
gaaaaccgccgtcaggtggacaaatttcttgcggcgcaaagcaacttccgcctgctggat
gatgagtgtattacgcccgcaaatcagggttttgacggcttttatctcgcccgcatagag
agaatcgcggagtag
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