Shewanella cyperi: JYB88_09500
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Entry
JYB88_09500 CDS
T07829
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
scyp
Shewanella cyperi
Pathway
scyp00541
Biosynthesis of various nucleotide sugars
scyp01100
Metabolic pathways
scyp01250
Biosynthesis of nucleotide sugars
Module
scyp_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JYB88_09500 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
scyp01005
]
JYB88_09500 (kdsB)
Enzymes [BR:
scyp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
JYB88_09500 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
scyp01005
]
Lipid A
JYB88_09500 (kdsB)
BRITE hierarchy
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
QSX28540
UniProt:
A0A974XHM1
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Position
2186253..2186990
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AA seq
245 aa
AA seq
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MNVTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERAALAKGLSAIYVATDDERIKDAVE
AFGGKVVMTGTHAASGTDRIEDAITQLGLGDDDLVINLQGDQPLIDPISIEQIIELFRRH
PGEFEMATLGYQITDKEELDDPKHVKMVFDNEMNALYFSRARIPFGRDVSEYPVYKHLGV
YAYTRRFVHTFNSLPLGRLEDLEKLEQLRALEFGHKIKVAISAFDSPEVDTPEDIRRCEA
RLKVE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcaccctgttgatcccggcccgctacggttccagccgttttcccggcaaacct
ttggcaccgattaacggcaagcccatgatccagcacgtatacgagcgtgccgccctggct
aagggcctcagtgccatttacgtggccaccgacgatgaacgcatcaaggatgcggtcgaa
gccttcggcggcaaggtggtcatgaccggcacccacgccgcctcgggcaccgacaggatt
gaagatgccatcacccagctgggcctgggagatgacgacctggtgatcaacctccagggc
gatcagcccctgattgaccccatttccatcgagcagatcatcgaactgttccgtcgtcat
cccggcgagttcgagatggccaccttgggctatcagatcaccgacaaggaagagctggac
gatcccaagcacgtcaaaatggtgttcgacaacgaaatgaacgccctgtacttctcccgc
gcccgtatccccttcggccgcgatgtgagcgagtatccggtttacaagcacttgggcgtt
tacgcctacacccgccgtttcgtgcacaccttcaacagcctgcccctgggccgcctggaa
gatcttgaaaagctcgaacaattgcgggccctggaatttggtcacaagatcaaggtcgcc
atcagcgccttcgactcccccgaggtcgacaccccggaagatatccgtcgctgtgaagcc
cgcctgaaggttgaatga
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