KEGG   Shewanella cyperi: JYB88_10710
Entry
JYB88_10710       CDS       T07829                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
scyp  Shewanella cyperi
Pathway
scyp03030  DNA replication
scyp03430  Mismatch repair
scyp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:scyp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    JYB88_10710
   03430 Mismatch repair
    JYB88_10710
   03440 Homologous recombination
    JYB88_10710
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:scyp03032]
    JYB88_10710
   03400 DNA repair and recombination proteins [BR:scyp03400]
    JYB88_10710
Enzymes [BR:scyp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     JYB88_10710
DNA replication proteins [BR:scyp03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     JYB88_10710
DNA repair and recombination proteins [BR:scyp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     JYB88_10710
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: QSX31876
UniProt: A0A975AMI7
LinkDB
Position
complement(2476706..2477386)
AA seq 226 aa
MNELALNARMSWRARRLHSQRLRHFFDSQRQLLSRPLEQVPILALDMEMTGLDPAKDQIL
AMGLVPVFERQIHLEDAASVLVSIDGSVGHSATIHGITDLDLSGGLTPAVALDWLLERAE
GHILLAHHAPLDLAFLQQAAQRQLGERLPLLAIDTLALERQRLLRNEDVLKEGSLRLDAC
RSRYGLPRYAAHNALTDALACAELFLAQSACLGKSLHCHELARLYR
NT seq 681 nt   +upstreamnt  +downstreamnt
ctgaatgaactggcactcaatgccagaatgagttggcgagcgcggagattgcactcacaa
aggttaaggcattttttcgacagccagcggcagctgttgtcacggcctttggagcaggta
cctatattggcgctggatatggaaatgaccggcctggatccggccaaagatcagatcctt
gccatgggtctggtaccggtttttgagcggcaaattcatctcgaggatgccgcttctgtg
ctggtgagcattgacggcagcgtggggcacagcgccaccattcatgggatcaccgacctt
gatctcagcggcggtctgacgccggcggtggcgttggactggctgctggagcgggccgaa
gggcatatattgctggcccaccatgcgccactggatctggcttttcttcagcaagcggcg
cagcggcagctgggggaaaggttaccactgctggccatagataccctggcgctggaaagg
caaagattgctgcgcaacgaagatgtgcttaaggaaggcagcttgcgccttgatgcctgc
cgcagccgttatggcctaccgcgctatgcggcccacaatgccctgaccgatgccctggcc
tgtgcggaactgtttttggcccagagtgcctgtcttggaaagtcccttcattgtcatgag
ctggccaggctctacaggtag

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