Shewanella cyperi: JYB88_10815
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Entry
JYB88_10815 CDS
T07829
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyp02000
]
JYB88_10815
Transporters [BR:
scyp02000
]
Other transporters
Pores ion channels [TC:
1
]
JYB88_10815
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl
Glycos_transf_2
Motif
Other DBs
NCBI-ProteinID:
QSX28767
UniProt:
A0A975AIZ5
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All DBs
Position
2506382..2509165
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AA seq
927 aa
AA seq
DB search
MQTNNTLAKAIRFALIGGASVSAMQMSVVSAAEADAGAKVERIAVTGSRIQRTDMETANP
ITVFNAEDIEKSGFSTVAEFLRTNAASGGFNESSTLSQAAGASSVGLKGFASDYTLILLN
GRRLPKNSAGGIFTDVNQVPMAAVARIDILPDGASAIYGSDAVAGVINIITKTDFEGVAL
SAKYGAALEHNDGKELNVSVVAGASGEKTNILFTAEHFSRGAIQATDREFGRTAFIEGHP
GGDGRSSWGIPGFTSINSALGEDGKRLDNAAKGEGSVPWSDCPENDVLSNGRCAYDFASL
YQIQPETERQSLFTSITHEASDDLVIDGQFRYTRAYTLTSNAPAPGQVDVSQSPFLADFL
RNDRYKDDAAKADEIIRLVEAGEAVVSVGRRYIDFPNRQKDNTNETFEAVVGMNYNIDDN
WALDFDLGHSKLTNRQIGAAGQLLASNVADAFNDPESKLNPFIVNDCSSDELAEICRDLQ
AAIHRTGEYDVTFSSLVLNGLVGLELPGGEVGIATGVDMRKEKYQDRSDPATVNGEVIGG
AGSNGGGKFDNIAGFLEVSLPLVENMELNLAVRHDKADWDLSDASDTTYSAKVSYRPIDD
LLLRASYGTGFKAPNLSDLFTSTSAGVQRAIDTKLCQAAGNNPAHPDCKRVELNSKSGGN
PELKPETSVSYNVGAVYQLTDELSFSLDYWSLKIEDVVGSLEIQEILDEEAKGNLTDLVV
RNSEGRLTDSARQGYVKSNLQNLSEQSATGLIYDLQYNSEFSFGNLSANLHAEQFLTYKQ
QSSAVQPLCDDIADDAARKFRLNGSVTYQLDDIETSLNMRFLPGFNDYEKRNTAAKTCQL
IGYYDVEYDEETGDVVNPGKPQHNAAYFQLDWTTAYYFADNNKLTFGIRNLLDRQPSFSA
PNDWPFYSQGTYDNIGRFAYLQYDVKF
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccaataatacattggccaaagccatccgctttgcgctgattggcggcgcttca
gtgtctgctatgcaaatgtcagttgtatctgcagccgaagcagatgctggtgccaaagtc
gagcgtatcgcagtgactggttcacgcattcagcgtaccgatatggaaaccgccaaccca
attacagtgttcaacgctgaggacattgaaaaatcaggtttctctaccgtagccgaattc
ctgcgtaccaacgctgcttctggcggctttaacgaatcatccaccctgagccaagccgcg
ggtgcctcttctgtaggtctgaagggctttgccagtgattacacactgatcctgctcaat
ggtcgtcgtctgcccaaaaactctgccggcggcatttttactgacgtaaaccaagtcccc
atggcagccgttgcccgcattgatattctgcctgacggcgcttcagccatttatggctca
gatgcagttgccggtgtaatcaacatcattaccaagacggatttcgaaggtgttgccctg
tctgccaagtacggtgcagcgttggaacacaacgacggtaaagaactgaacgtgtccgta
gtagccggtgcatcaggtgagaagaccaatatcctgttcaccgccgaacacttctcccgc
ggagccatccaagccacagatcgtgaatttggccgtaccgcctttatcgaaggtcatcca
ggtggcgacggtcgctcatcctggggtattccaggttttaccagcatcaactcagcactg
ggtgaagacggtaagcgtctagacaacgcagctaagggtgaaggctcagtaccttggtcc
gactgcccggaaaatgatgtattgtccaacggtcgttgcgcctatgacttcgcatccctg
taccagatccaaccggaaaccgagcgtcagtcgctgttcaccagcattacccatgaagcc
tcagacgacctggttatcgatggtcaattccgctatacccgcgcatatactctgacctca
aacgctccggctccaggtcaagttgacgtgtcacaaagcccattcctggcagacttcctg
cgtaacgatcgttacaaagatgatgctgccaaggccgacgagatcatccgcctggtcgaa
gccggtgaagcagtagtctctgttggacgtcgttatatcgacttcccaaatcgtcagaaa
gacaataccaacgaaacttttgaagccgttgttggtatgaactacaacatcgatgacaac
tgggcattggacttcgatctgggtcactccaagctgaccaaccgtcagattggtgccgct
ggtcaactgctcgccagcaacgtcgccgatgcgttcaacgatcctgaatcaaaactcaat
ccttttatcgtcaacgattgctcctcggacgaactggctgaaatctgtcgtgatttgcag
gcagccatccaccgtaccggtgagtatgacgtcaccttctcttctctggtgttgaatggt
ctggttggtttggaactgcccggtggtgaagtgggtatcgccaccggtgtcgacatgcgt
aaagagaaataccaggaccgctccgatccagccacagtgaatggtgaagtgattggtggc
gccggctccaacggcggcggcaagttcgacaatatcgccggcttcctggaagtatctctg
cctctggtggaaaacatggagcttaacctggcagtccgtcacgacaaggctgactgggat
ctgagcgatgccagcgataccacttactcagccaaagtgtcttatcgtccaatcgatgac
ctgttgctgcgcgcttcatacggtaccggcttcaaggctccaaacctgtccgatctgttc
accagcacctctgccggcgttcaacgcgctatcgacaccaagctgtgccaggcggccggt
aacaatccagctcatccggattgtaaacgcgtagagctgaactccaagagcggtggtaac
ccagagctgaaaccagaaacctctgtgtcttacaacgtgggtgcggtttatcagctgacc
gacgagctgtcattctcgctcgactactggtcactgaagattgaagacgtagttggctcc
ctggaaattcaggaaatccttgacgaagaagccaagggcaatctgactgatctggttgta
cgtaactcagagggtcgcctgacagactcagcccgccagggttatgtaaagagcaacttg
caaaacctgtctgagcaaagcgcaaccggtctgatttacgacctgcaatacaacagcgag
ttctcattcggtaacctgagtgccaacctgcatgctgagcagttcctgacttacaagcag
caatcatctgcggtacagcctttgtgtgatgacatcgccgatgacgccgcacgcaagttc
cgtctcaatggcagcgtgacatatcagctggatgacattgaaacctcactgaacatgcgt
ttcctgccaggcttcaatgactacgagaaacgcaatacagccgccaagacctgtcagctg
atcggttactatgatgtggaatacgacgaagagaccggtgacgttgtcaacccaggtaag
ccacagcacaatgctgcttacttccagctggattggaccacggcctactactttgccgac
aacaacaagttgaccttcggtattcgcaacctgctggacagacagccttcattcagcgct
ccgaatgactggccgttctatagtcaaggtacctatgacaacataggtcgcttcgcctat
ctgcaatacgacgtgaaattctaa
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