Shewanella cyperi: JYB88_10990
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Entry
JYB88_10990 CDS
T07829
Symbol
rluB
Name
(GenBank) 23S rRNA pseudouridine(2605) synthase RluB
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scyp03009
]
JYB88_10990 (rluB)
Enzymes [BR:
scyp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
JYB88_10990 (rluB)
Ribosome biogenesis [BR:
scyp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JYB88_10990 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
HEAT_EZ
Motif
Other DBs
NCBI-ProteinID:
QSX28798
UniProt:
A0A974XK97
LinkDB
All DBs
Position
complement(2546972..2547850)
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AA seq
292 aa
AA seq
DB search
MSEKLQKVLARAGHGSRREMEAWIAAGRVSIDGEIANLGDRIEADAKVRIDGRAVSLKSA
DDIICRVLAYHKPEGEICSRKDPEGRPTVFDRLPKVRDARWVAVGRLDINTSGLLLFTSD
GELANRLMHPSNEVEREYAVRTFGEVSDATIQKLRTGVMLEDGPAQFDYIKAAGGEGINQ
WWHVGLKEGRNREVRRLWESQEVQVSRLIRVRYGMVELPKSLPRGGWIELPLEQVNYLRQ
LAGLEPETRSMLGTDKHSVARAQVRSAKIRRAVRKHKVTGASGKPKPTRTRS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaaattgcagaaagtcttggcccgtgcaggccatggctcccgtcgtgagatg
gaggcatggattgctgcaggccgagtgagtattgacggtgaaattgccaatttgggtgac
agaatagaggccgacgccaaggtgcgtatcgacggccgtgcagtgtcactcaagtctgcc
gatgacattatctgtcgggtgctggcttaccataagccggaaggtgagatctgttcccgt
aaagaccccgaagggcgtccaaccgtgttcgatcgcctgcccaaggtgcgtgatgcccgc
tgggtggccgtgggccgcctggacatcaacacctcggggctgttgctgttcacctccgac
ggtgagctggccaaccgcctgatgcacccctcaaacgaggtggagcgtgaatacgcggtg
cgcacctttggtgaagtgtccgatgccaccatccaaaaactgcgtaccggcgtaatgctg
gaagacggtccggcccagtttgactatatcaaggccgccggtggtgaaggcattaaccag
tggtggcacgtgggtctgaaagaaggccgtaaccgcgaagtgcgccgcctgtgggaatcc
caggaagtgcaggtcagccgccttattcgggtgcgttacggtatggtggaactgcccaaa
tctttaccccgcggtggttggattgagttgccgctggagcaggttaactacctgcgccaa
ctggccggtcttgagcccgagacccgctccatgctgggtaccgacaagcacagtgtggcc
cgcgcccaggtgcgcagcgccaagatccgccgtgcggtacgcaagcacaaggtgacaggt
gcctccggcaagcccaagccaacccgcacccgcagctaa
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