Shewanella cyperi: JYB88_11400
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Entry
JYB88_11400 CDS
T07829
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
scyp
Shewanella cyperi
Pathway
scyp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JYB88_11400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyp02000
]
JYB88_11400
Transporters [BR:
scyp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JYB88_11400
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
MMR_HSR1
AAA_22
AAA_29
AAA_16
DUF6338
DUF87
Septin
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
QSX28875
UniProt:
A0A975AJA3
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Position
2641025..2642863
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AA seq
612 aa
AA seq
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MDKLFSRFERWTNPLPADEATQPPRGLYAFCRHYTRGFELQLIIMSVLTAMLAMLEVSLF
GFMGQLVDWLVDKDPSTLFAEEGRTLLWMTLLLLVAIPVLVLLHALIVYQSLLGNYPMAI
RWLAHRYLLRQSVSFYHNDFAGRIATKVMQTALAVRETVMKLLDVLVYILVYFTTMVVMI
AKADLRLVLPMLLWLCCYIGLQWYFVPRLKKVATEQADARSTMTGRIVDSYTNITTVKLF
AHTQREADYAQSSMEGFLQTVYRQMRLVTGINVSVQILNYLLVFCVAAMSIWLWSESAIT
IGAIAIAVSLALRLNGMSQWIMWEVSSLFENIGTVADGMNTLSKPTQIQDAPDAPPLKVN
HGQIDIRNVSFHYGESHGVIEGLDLSIAAGEKVGLVGRSGAGKSTLVNLLMRFHDVERGE
ICIDGQNITQVNQDSLRAHIGMVTQDTSLLHRSIRENILYGRPDASEEELLQAIRKAQAA
DFIAELSDPDGHQGLDAKVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEV
EAAIQESLYQLMEGKTVIAIAHRLSTIAAMDRLIVLDEGRIVEQGSHQQLVKSGGIYAQL
WAHQTGGFLGVE
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggataaacttttttcccgcttcgagcgctggaccaatccgctgccggccgacgaagcc
acgcagccgccccgcggcctttatgccttttgccgccattacacccgcggctttgaactg
cagttaattatcatgtcggtgctcaccgccatgctggccatgctggaagtgtcgctgttt
ggttttatggggcagctggtggattggctggtggacaaggatcccagcaccctgttcgcc
gaggaaggccgaaccttgctgtggatgacgctgttgctgctggtcgccattcccgtgctg
gtattgctgcacgcgctaattgtctaccagagcttgctcggcaactaccccatggccatt
cgctggctggcacacagatatttactgcgccagagcgtatctttctatcacaatgatttt
gctggtcgcattgccaccaaggtcatgcagacggcgctcgcagtacgggaaaccgtgatg
aaactgctggatgtgctggtctacatattagtgtatttcaccaccatggtggtgatgata
gccaaggccgatctgcgtctggtgctgccgatgctgctatggctgtgctgctatatcggt
ctgcaatggtatttcgtgccacgcctgaaaaaggtcgccaccgagcaggccgacgcccgc
tccaccatgacaggccgcattgtcgacagctacaccaatatcaccacggtcaaactgttc
gcccatacccagagagaagccgattacgcccaatcctccatggagggctttttgcagact
gtgtaccggcagatgcgcctggtgaccggcatcaacgtcagcgtgcagatcctcaactac
ctgctggtattttgcgtcgccgccatgtccatttggctgtggagcgagagtgccatcacc
ataggcgccatcgccattgccgtcagcctggcgctgcgactcaacggcatgtcccaatgg
atcatgtgggaagtcagctcgctgtttgaaaatataggcacagtggccgatggcatgaat
accctgtcgaagccaacccagatccaggatgcgcccgatgcaccgccgctgaaagtcaat
cacggccagatagacatacgtaatgtcagctttcactatggcgagtcacatggcgttatc
gaagggctggatttatccatcgccgccggcgaaaaagtcggcttggtgggccgctccggc
gccggcaagtcaaccctggtgaatctgctgatgcgcttccacgatgtggagcgcggtgag
atctgcatcgatggccaaaatatcacccaggtcaatcaggattcactgcgggcccacata
ggcatggtgacccaggatacctcgttgctgcatcgctccattcgggagaacattctttat
ggtcgtcccgatgccagcgaagaagaattgctgcaggcgatccgcaaggcccaggcagca
gactttattgccgagttgtccgatcccgatggtcatcagggactggacgccaaggtggga
gagcgcggggtcaaactgtcgggcggccaaaggcaacgtattgccatcgccagggtgctg
ctcaaggatgcgccgatattgatcctggacgaggccacctcggcactggattccgaagtg
gaagcggccatccaggaaagtctgtatcaactgatggaaggcaagactgtgatagccatt
gcccaccgcctgtcgaccatagcggccatggatcgcctgatagtgcttgatgaaggcagg
attgttgaacagggcagccaccagcagttggtgaaaagcggcggtatctatgcccagctt
tgggcacatcagactggtggcttcctcggcgtagaatga
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