KEGG   Shewanella cyperi: JYB88_11695
Entry
JYB88_11695       CDS       T07829                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
scyp  Shewanella cyperi
Pathway
scyp00521  Streptomycin biosynthesis
scyp00523  Polyketide sugar unit biosynthesis
scyp00525  Acarbose and validamycin biosynthesis
scyp00541  Biosynthesis of various nucleotide sugars
scyp01100  Metabolic pathways
scyp01110  Biosynthesis of secondary metabolites
scyp01250  Biosynthesis of nucleotide sugars
Module
scyp_M00793  dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:scyp00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    JYB88_11695 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    JYB88_11695 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    JYB88_11695 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    JYB88_11695 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    JYB88_11695 (rfbB)
Enzymes [BR:scyp01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     JYB88_11695 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD Polysacc_synt_2 RmlD_sub_bind NAD_binding_4 adh_short Sacchrp_dh_NADP KR Gp_dh_N
Other DBs
NCBI-ProteinID: QSX28921
UniProt: A0A975AJP1
LinkDB
Position
complement(2696038..2697135)
AA seq 365 aa
MKILVTGGAGFIGSAVVRHIINNTQDSVINVDKLTYAGNLESLVSVEKDERYAFEQVDIC
DRAELDRVFDEHKPDAVMHLAAESHVDRSIIGPADFIQTNIVGTYTLLEATRAYWNDLSA
GEKTAFRFHHISTDEVYGDLPHPDEVRNSEELTLFTETTPYAPSSPYSASKASSDHLVRA
WLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKSLPIYGKGDQIRDWLYVEDHA
RALYKVVTEGLIGETYNIGGHNEKKNLEVVQTICEILDELMPKDAPYADQITYVTDRPGH
DRRYAIDACKMSKELNWLPEETFETGLRKTVQWYLDNQIWSQRVQDGSYQRERLGVISSS
QEGDK
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgaagattttagtcacaggtggagccggttttataggctctgcggtcgttcgtcacatc
atcaataatactcaggatagcgtaattaatgtcgacaaattgacttacgctggcaatctt
gagtcacttgtcagcgttgagaaagatgaaagatacgcttttgagcaagtcgatatctgt
gatcgagctgaactagatagagtctttgatgagcacaagccagatgctgtaatgcatctc
gctgcagagtcgcatgtagaccgttcaataataggtccagctgactttattcagaccaac
atcgttggtacttacacccttcttgaagcgactcgtgcatattggaatgatctatctgca
ggtgaaaagaccgcttttcgttttcatcatatttctacagatgaggtttatggtgactta
cctcatccagatgaagtgcgaaattcagaagagttaaccctattcactgaaactactcct
tatgcgccaagcagtccttattcagcatctaaagcatctagtgatcacctcgttcgcgct
tggttgcgcacgtatggtttgccaacaattgtgaccaattgctcaaataattatggtcct
taccactttcctgaaaaacttattcctcttgtgattttaaatgcattggaaggcaagtct
ttgcctatttatggtaaaggtgatcaaatccgtgattggctatatgtagaagatcatgct
cgtgcgctatataaggtggttactgaaggcttgattggtgaaacctataacattggcggt
cataatgaaaagaaaaatttggaagtagttcaaactatctgtgaaattttagatgaatta
atgcctaaggatgctccttatgcagaccaaattacttatgtgacagatcgtccaggtcat
gaccgtcgctatgccattgatgcctgcaaaatgagcaaagagctgaactggttgcctgag
gagacgttcgaaactggtcttcggaaaacggtacagtggtatcttgataaccagatttgg
agtcaacgtgtacaagatggttcttatcaaagagaacgtttaggcgtaattagtagctct
caggaaggtgataagtaa

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