Shewanella cyperi: JYB88_12145
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Entry
JYB88_12145 CDS
T07829
Symbol
cydB
Name
(GenBank) cytochrome d ubiquinol oxidase subunit II
KO
K00426
cytochrome bd ubiquinol oxidase subunit II [EC:
7.1.1.7
]
Organism
scyp
Shewanella cyperi
Pathway
scyp00190
Oxidative phosphorylation
scyp01100
Metabolic pathways
scyp02020
Two-component system
Module
scyp_M00153
Cytochrome bd ubiquinol oxidase
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
JYB88_12145 (cydB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JYB88_12145 (cydB)
Enzymes [BR:
scyp01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.7 quinol oxidase (electrogenic, proton-motive force generating)
JYB88_12145 (cydB)
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Motif
Pfam:
Cyt_bd_oxida_II
Motif
Other DBs
NCBI-ProteinID:
QSX29002
UniProt:
A0A974XIF6
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Position
complement(2787620..2788759)
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AA seq
379 aa
AA seq
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MFDYETLRFIWWALIGVLFVGFAVTDGFDMGVGMLLPVIGKDDTERRIMINSVAPHWDGN
QVWLITAGGALFAAWPMVYAVSFSGFYLAMVLVLLALFLRPVGFDYRSKIEDPRWRKSWD
KALFIGSFVPPLIIGVAFGNLLQGVPFDFDEYLRATYHGGLLGLLNPFGLLSGVICVSMF
MMQGSAWLQMKTEGELRVRAAKVSVAVALVLMLLFAAAGFWVANGIDGYVLTSVLDHGAA
SNPLNKTVATVTGAWMANYQSWPLTLIFPALGLFMPLLVVLASLLNRSGLAFLASSMASS
GVILTCGAAMFPFVMPSSLVPNASLTMWDATASATSLTVMTLAAMVFVPIVLGYTTWTYL
KMYGRLNRQFIDSNKTSLY
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattatgaaaccttgagatttatctggtgggcgctcattggggtgttgttcgtc
ggctttgccgttaccgatggttttgatatgggcgtgggtatgctgctgcccgtgattggc
aaagatgacacagagcggcgcatcatgatcaactcggtcgccccccactgggacggtaat
caggtgtggctcattaccgcagggggcgccctgtttgccgcctggcccatggtgtatgcc
gtatccttttccggtttttatctcgccatggtactggtgctgctggcgttgttcctgcgc
cccgtgggcttcgactatcgctccaaaattgaagatccccgctggcgcaagtcctgggac
aaggcgctgtttatcggctcctttgtgccgccgctcatcataggcgtggcctttggcaac
ctgttgcagggcgtccctttcgacttcgatgaatacctgcgcgccacctatcacggcggt
ttgctggggctgctcaatccctttggcctgttgtccggtgttatctgtgtttccatgttc
atgatgcagggctcggcctggttgcagatgaagaccgaaggggaactcagggttcgtgct
gccaaggtttctgtggcggtagccctggtgctgatgctgttgtttgccgccgccggtttc
tgggtggccaatggtatagacggttacgtgctgacctctgtgcttgatcacggcgccgcc
tccaatccgctcaacaagacggtggcaaccgtgaccggtgcctggatggccaactaccag
agctggccgctgaccctgatatttccggccctgggactctttatgccgctgttggtggtt
ttggcgagcctgcttaatcgcagcggtctggctttcctggccagttcaatggccagtagc
ggggtgatcctgacctgcggcgccgccatgttcccgtttgtgatgccctcgtcactggtg
cccaacgccagcctgaccatgtgggatgccaccgccagcgccaccagtctgacagttatg
actctggccgccatggtgtttgtgcccatagtgcttggctacaccacctggacctatttg
aaaatgtatggccggcttaatcgccagtttatcgattccaacaagacatcactttactag
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