Shewanella cyperi: JYB88_12200
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Entry
JYB88_12200 CDS
T07829
Symbol
bamB
Name
(GenBank) outer membrane protein assembly factor BamB
KO
K17713
outer membrane protein assembly factor BamB
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyp02000
]
JYB88_12200 (bamB)
Transporters [BR:
scyp02000
]
Other transporters
Pores ion channels [TC:
1
]
JYB88_12200 (bamB)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
PQQ_2
Beta-prop_ACSF4
PQQ
Beta-prop_EMC1_N
DUF6906
Motif
Other DBs
NCBI-ProteinID:
QSX29012
UniProt:
A0A975AK58
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All DBs
Position
complement(2805992..2807179)
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AA seq
395 aa
AA seq
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MKSWCKNLLVAGLSLAALSACSSNDVEEEPVSELKEINATVFPQINWDEKVGSGVGDYYS
RLRPAVRYGKIFVADRYGEVTAFDEASGDKVWSQDFSELFRDNVLAKNKGARLAAGVTVA
QNKVFIGGESGLLGALDANTGEVVWYALAGGELLSAPTVAEDLVVVNTGAGALEAFNIDT
GAKVWSYDNGLPNLTLRGTGAAAYEGGGFFVGTADGKVAVVIKQNGQPAWEQAIYSPSGG
NEFSRMADVDMTPLLIGDNLYAVSYNGNLVSMEARTGRVVWTRKYSSFNELASSGVQLYL
VDDHSRIYAIDRRNGLEMWSNSELSNRAVTSPEVFGDYLVVGDFEGYLHFIDRADGKLVG
RIEVDSSGLYGQPLVVDNKIYVQGRSGKVAIVTLP
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcttggtgcaaaaacctgctcgtagccgggctgagcttggcagccctgtcggcc
tgttcttccaacgatgtggaagaagagcccgtcagtgagctcaaggaaatcaatgccacc
gttttcccccagatcaactgggatgaaaaggtcggcagtggtgtcggtgactattactcc
cgcctgcgccctgcagtgcgttacggcaaaatatttgttgccgatcgctacggtgaggtg
acggcctttgatgaggccagcggtgacaaggtctggtcccaggacttcagcgaactgttc
cgtgacaatgtgctggccaagaacaagggcgcccgtctggcggccggtgtcactgtggcc
cagaataaggtgttcattggcggcgaaagcggccttctgggtgccctggatgccaatacc
ggcgaggtggtgtggtatgccctggccggaggcgagttgttgtcggcaccgaccgtggcc
gaggatctggtggtggtgaataccggcgccggtgcccttgaggccttcaacatagacaca
ggcgccaaggtctggagctatgataatggtctgccgaacctgacgctgcgtggcacaggt
gccgcagcctatgaaggtggtggcttctttgtcggcaccgccgatggcaaggtggccgtg
gttatcaagcaaaacggtcagcccgcctgggaacaggccatctacagccccagcggtggc
aacgaattcagccgcatggccgacgtggatatgaccccgctgctgataggtgataacctg
tacgctgtcagctataacggtaacctggtgtccatggaagcccgcactggccgcgtggtg
tggacccgcaagtattccagcttcaacgagctggcaagctccggggtgcaactgtatctg
gtggatgaccacagccgcatctacgccatcgacaggcgcaacggtctggaaatgtggagc
aactcagagctcagcaaccgtgccgtgacatcacctgaggtgttcggtgattacctggtg
gttggtgatttcgaaggctatctgcactttatcgaccgtgccgatggcaagttggtgggt
cgcatcgaggtagacagcagcggcctgtatggccaaccgctggtggtggacaacaagatt
tatgtccagggccgcagcggcaaggtggccatagtcacacttccttaa
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