Shewanella cyperi: JYB88_12230
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Entry
JYB88_12230 CDS
T07829
Symbol
trmG_rlmN
Name
(GenBank) bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scyp03009
]
JYB88_12230 (trmG_rlmN)
Enzymes [BR:
scyp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
JYB88_12230 (trmG_rlmN)
Ribosome biogenesis [BR:
scyp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JYB88_12230 (trmG_rlmN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RlmN_N
Radical_SAM
Radical_SAM_2
Motif
Other DBs
NCBI-ProteinID:
QSX29018
UniProt:
A0A974XKP0
LinkDB
All DBs
Position
complement(2812227..2813348)
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AA seq
373 aa
AA seq
DB search
MSEKKINLLDLDRKAMRALFAELGEKPFRADQLMKWIYHFGVSDFEQMTNINKVLRGKLA
ARCEIVAPEISSFQKSKDGTIKFAINVGQGQEVETVYIPEDDRATLCVSSQVGCALECTF
CSTAQQGFNRNLTVSEIVGQIWRVSHFLGFQKETGERPVTNVVMMGMGEPLLNLANVIPA
MDIMLDDFGFALSKRRVTVSTSGVVPALDKLGDALDVALAVSIHAPNDELRDVLVPINKK
YPLQEFLAGIRRYLEKSNANRGRVTVEYVMLDHINDSTEQAHELAELMKDTPCKINLIPF
NPYPGSPYGRSSNSRIDRFSKVLMDYGLTVIVRKTRGDDIDAACGQLAGDIRDRTKRLAK
KRMQESQISVTME
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaagaaaatcaatctgctggacctggatcgcaaggcgatgcgggcgctgttt
gccgaactgggcgagaagccatttcgtgccgatcagttgatgaagtggatttatcacttt
ggcgtcagtgacttcgaacagatgaccaatatcaacaaggtgctgcggggtaaacttgcg
gcccgttgtgaaattgtggcgccggaaatttccagcttccagaaatccaaggatggcacc
atcaagtttgccattaacgtgggtcaggggcaggaagtggaaaccgtgtatattccggaa
gacgaccgcgccaccttgtgtgtctcctcccaggtgggttgcgccctggaatgtaccttc
tgttccaccgcccagcagggctttaaccgtaacctgacggtatctgaaatcgttggtcaa
atctggcgcgtgtcccacttcctcggtttccagaaggaaaccggcgagcgccccgtcacc
aacgtggtgatgatgggcatgggtgagccgctgctgaacctggccaatgtgatccccgcc
atggatatcatgctggacgatttcggttttgccctgtccaaacgtcgggtgactgtgtcc
acctcgggtgtggtgccggcgctggataagctcggtgatgccctcgatgtggccctggcg
gtgagcattcacgcccccaatgatgagctgcgcgatgtattggtgcccatcaacaagaag
tacccattgcaggagttcctcgccgggatccgccgttacctggagaaatccaatgccaac
cgtggccgggtaacagtggagtacgtgatgctggatcatatcaacgacagcaccgaacag
gcccatgaattggccgagttgatgaaggataccccttgcaaaatcaacttgataccattt
aacccctatccgggttcgccctatggccgctcctccaattcccgcatcgaccgattctcc
aaggtgctgatggactacggcctgaccgtgatagtgcgcaaaacccgtggtgacgacatt
gatgccgcctgtggtcaattggccggtgacatcagggatcgcaccaagcgactggcaaaa
aaacgcatgcaagaatcccagatttcagtcacaatggaataa
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