Shewanella cyperi: JYB88_12470
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Entry
JYB88_12470 CDS
T07829
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scyp03009
]
JYB88_12470
Enzymes [BR:
scyp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
JYB88_12470
Ribosome biogenesis [BR:
scyp03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
JYB88_12470
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Ubie_methyltran
Methyltransf_31
Methyltransf_25
RsmF-B_ferredox
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
QSX31902
UniProt:
A0A975ALX5
LinkDB
All DBs
Position
2857782..2859011
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AA seq
409 aa
AA seq
DB search
MESGQSADRVLAAYFKLNRKHGSKDRKLIRETLFALFRWWGWARKLPLEGDALWHGQLAL
CAALEQHLWEDIRAAWAMEAGWQQLALPGFDTPSATALQLSQLLAPVQFHAADLVPDWFW
PLLPPLDDAEREALLTSLCKRPPIWARAQGMARDQAVSDLRALGIEASAAPYFSDALSLG
SKSINLNEITLYTAGKLEIQDLSSQVIGQVCDPKPGESWWDACAGAGGKSLQLSSLMANR
ATSANAGQIVASDIRALALEELGKRARRAGFANISVARWRSDALPVDAGSFDGVLVDAPC
SCTGTWRRNPDMRWLDSATAVTDKPELQLDILRRASAAVRKGGVLVYATCSLAEAENRAV
AEAFLAAHPEFVPEEFTHPFSGERCTMATVWPQQANSDGMFVARFRRLD
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtggccagagtgccgatagggtgctggccgcctatttcaagctcaatcgcaaa
catggctccaaggacagaaagcttattcgtgagaccctgtttgccctgtttcgctggtgg
ggctgggcccgcaaactgccccttgagggcgatgccctctggcacgggcaactggccctg
tgtgccgcgctggagcaacatctctgggaagacattcgcgccgcctgggcgatggaggcc
ggttggcagcaactggcactgcccggctttgataccccctctgccaccgctctgcagctg
agccaactgctggcgccggtgcaatttcacgcagccgatctggtgcccgactggttctgg
cccctgttgccgccactggatgacgccgaacgggaagcgcttctgaccagcctgtgcaaa
cggccccccatttgggccagggcccagggaatggcgcgcgaccaggccgtgagcgacctg
cgcgccctcggcatagaggccagcgcggccccctatttcagcgatgccctgagccttggc
agcaagagcatcaatctcaatgaaattaccctctacactgcaggtaagcttgagatacag
gatctgtcctcccaggtgataggccaggtctgtgaccccaagccgggtgagtcctggtgg
gatgcctgcgccggtgccggcggcaaaagcctgcaactgagctcgctgatggccaacaga
gctacatcggccaatgcaggccaaatcgtcgcctctgacatccgcgccctggccttggaa
gagctgggcaagcgagcccggcgcgccggttttgccaacatcagcgtcgcccgttggcgc
agtgacgccctgccggtggatgcaggcagttttgatggcgtgttggtggatgccccctgc
agttgcaccggcacctggcgccgcaatccggacatgcgctggctggactcggccaccgcg
gtcactgacaagcctgaactgcagttggacatactgcgccgcgccagtgccgcggtcaga
aaaggcggcgtgctggtgtatgccacctgctccctggccgaggcggaaaaccgggccgtg
gccgaggcgtttctcgcggcacaccccgaatttgttcccgaggaattcacccatcccttc
agtggcgagcgctgcaccatggccacggtctggccgcagcaagccaacagcgacggcatg
ttcgttgcccgctttaggcgcctggattga
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