Shewanella cyperi: JYB88_12680
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Entry
JYB88_12680 CDS
T07829
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
scyp
Shewanella cyperi
Pathway
scyp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JYB88_12680 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scyp03400
]
JYB88_12680 (mutS)
DNA repair and recombination proteins [BR:
scyp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
JYB88_12680 (mutS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
MutS_C
Motif
Other DBs
NCBI-ProteinID:
QSX29092
UniProt:
A0A974XIL7
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Position
2897767..2900349
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AA seq
860 aa
AA seq
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MNSTDFDDLEKHTPMMRQYLTMKAAHPDMLLFYRMGDFYELFYEDAKRASQMLGISLTAR
GKSGGDPIPMAGIPYHAVEGYLAKLVQIGQSVAICEQIGDPATSKGPVERKVVRVVTPGT
LTDEALLQERQDNLLAAVYQGKVGFGYATLDVASGRFVVAELDSREALEAELQRTSPAEL
LYSEDFGELALINHFKGKRRRPEWEFDYDTCVKLLLEQFGTRDLRGFGITDARLSLQAAG
CLMQYVRDTQRTALPHINSIVRFNQSDAIVLDAATRRNLELTQNLSGGRDSTLASVLDNT
ATAMGSRMLQRWIHQPLRNRKQIESRQGAVSELLDTQGFEALSHTLRNLGDIERILARLA
LRSARPRDFARLRDALGLLPELKQHLEASQSQHLQQLALLLGEFPAEQDLLERAIVDNPP
MLIRDGGVIRPGYNAELDEWRGLSEGATDYLQQLEIREKERSGIATLKVGYNRVHGYYIE
VSRAQSALVPLSYQRRQTLKNTERYITPELKEYEEKVLSSQGKALALEKQLWDELFDLVL
PRLHDLQAFARAAAELDVLANFAERAETLGYQCPELSDRIGILIEAGRHPVVERVNQTPF
IPNPVELSSERRMLVVTGPNMGGKSTYMRQVALITLMAHIGCFVPAQRAIIGPVDRIFTR
IGASDDLASGRSTFMVEMTETANILHNASANSLVLMDEIGRGTSTYDGLSLAWAAAEYLA
QRLGAMTLFATHYFELTQLPELIAGVHNVHLDAVEHDDTIAFMHAVQEGAASKSYGLQVA
ALAGVPSQVIALAKHKLHQLENRDHQVPTTGKQNLAQQSLALSLPAEPSAAETRLKQLKP
DELTPRQALDLLYELKALVK
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcacagatttcgacgatttggaaaaacacactcccatgatgcgtcagtacctg
acgatgaaggcagcccatccggatatgctgctgttttaccgcatgggtgatttttatgaa
ctcttctatgaggatgccaaacgcgcctcgcaaatgctgggcatatccctcacagcacgc
ggcaagagcggcggcgatcccatccccatggccggtatcccctatcatgcggtggaaggt
tatctggcaaagctggtgcaaattggccagtcggtggccatctgcgaacagataggtgac
cctgccaccagcaaggggccggtggagcgcaaggtggtgcgggtggtcacgcccggcacc
ctgaccgatgaagctctgctacaggagcgccaggacaacctgctggccgccgtctatcag
ggcaaggtaggtttcggctatgccaccctggatgtggcctcgggccgctttgtggtggcc
gaactcgacagccgtgaggccctggaggccgagctgcaacgcaccagtcccgccgaactc
ctgtacagcgaagacttcggcgagctggcactgattaaccatttcaagggcaaacggcgc
cgtcccgaatgggaatttgactatgacacctgcgtcaaattgctgctggaacagtttgga
acccgtgacttgcgcggctttggtattacagatgcacgcctgtcgctgcaggcggccggc
tgcctgatgcaatatgtacgcgatactcagcgcaccgccctgccccacatcaattccata
gtgcgcttcaaccagagcgacgccatagtgctggacgcggcgacccgccgcaatctggaa
ctgacgcagaacctctccggtggtcgcgacagcaccctggcgagcgtgctcgacaatacc
gccaccgccatgggcagtcgcatgttgcagcgctggatccatcagccactgcgcaacaga
aagcaaattgaatcccgtcagggcgccgtgagcgaactcttggacactcaaggctttgaa
gcactcagccacacgctgcggaacttaggggatattgagcggatcctcgcccgtctggcg
cttagaagcgccagacccagggactttgcccggttgcgggatgccctgggattattgcca
gaactcaaacaacatctcgaagcaagccaaagtcagcacctgcaacaactggcactgctg
ctgggggagttcccggcggagcaggatttgctggagcgtgccatagttgacaacccgccc
atgcttatccgcgatggcggcgtgatccgccccggctacaacgccgaactcgacgagtgg
cgcggtctcagcgaaggggcaaccgactatttgcagcaactggagatccgcgagaaggaa
cgctccggcatagccaccctcaaggtgggctacaaccgggtccatggctattacatagaa
gtcagccgcgcccagtcggcgctggtgcccttgtcgtaccaaagacgccaaaccctgaag
aacacagagcgctatatcacccccgagctcaaggaatacgaggaaaaggttttgtccagc
cagggcaaggcgctggcgctggaaaaacagctgtgggatgaactgttcgatctggtgctg
ccaaggctgcacgatctgcaggccttcgcccgcgccgcggcggaactggacgtgctggcc
aacttcgccgagcgcgccgaaaccctcggctatcaatgcccggaactgagcgacagaatc
gggattttgatcgaggccggccgccatcccgtggtggagcgggtcaaccagacgcccttt
attcccaacccggtggagctctcgagcgagcggcgcatgttggtggtgaccggccccaac
atgggcggtaaatccacctacatgcgtcaggtggcactgatcaccctgatggcccacata
ggctgctttgtgccggcacagcgagccattattggcccggtggacaggatcttcacccgc
atcggcgccagcgatgatctggcctcgggccgctccaccttcatggtggaaatgaccgag
accgccaacatattgcacaacgccagtgccaacagcctggtgctgatggacgaaattggt
cgcggcacctccacctatgatggcctgtcactggcctgggcggcggccgagtacctggcc
caacgcctgggcgccatgaccctgtttgccacccactattttgaactgacccagttgcct
gagctgattgccggagtccacaacgtacatctggatgcggtagaacacgacgacaccatt
gcctttatgcacgcggtgcaggagggtgctgccagcaagagctatggtttgcaggtggcg
gcgctggcgggggtgccgagtcaggtgatagccctggccaagcacaagttgcatcagttg
gagaaccgggatcaccaggtgccaaccacgggtaagcaaaacctggctcagcagagcctg
gccttgagtctgccggccgagccttcggccgccgaaaccaggctcaagcagctgaagccg
gacgaactgactccacgccaggcgctggatttgctctatgaactcaaggccttggtaaag
tag
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