Shewanella cyperi: JYB88_13165
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Entry
JYB88_13165 CDS
T07829
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scyp03016
]
JYB88_13165 (miaB)
Enzymes [BR:
scyp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
JYB88_13165 (miaB)
Transfer RNA biogenesis [BR:
scyp03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
JYB88_13165 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QSX29175
UniProt:
A0A975AJK9
LinkDB
All DBs
Position
2997262..2998686
Genome browser
AA seq
474 aa
AA seq
DB search
MSKKLHIKTWGCQMNEYDSSKMADLLGEYQGYTLTEEAEEADILLLNTCSIREKAQEKVF
HQLGRWKTLKDKNPNLIIGVGGCVASQEGKAIKDRAQCVDIVFGPQTLHRLPDMIEQVRN
GDKAVIDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCSFCVVPYTRGEEVSRPMDD
IILEIAQLAEQGVREVNLLGQNVNAYRGAKHDGEICSFAELLRYVAAIDGIDRLRFTTSH
PIEFTQDIIDVYEDTPELVSFLHLPVQSGSDRILTAMKRGHMAIEYKSIIRRLRKARPDI
QISSDFIIGFPGETQDDFNDTMKLIEDVGFDHSFSFIYSARPGTPAADLPDDVDMEEKKQ
RLAQLQDKITNQAMRYSRQMLGTVQRILVEGPSVKNPMELRGRTENNRVVNFEGQPKHIG
SFVDVEIVDVYTNSLRGKFIRGEDEMDLRRSLRPEDILAKRQQDDALGVSKFIP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaaactccatatcaaaacctggggctgtcagatgaacgaatacgattcatcc
aagatggccgatctgcttggcgaatatcagggctacaccttgaccgaagaggccgaggag
gcagatattctgctgctcaatacctgttccattcgcgaaaaagcgcaggagaaggtgttt
caccaattgggtcgctggaagaccctgaaggacaagaaccccaacctgattatcggtgtc
ggcggttgcgttgcctcccaggaaggcaaggccatcaaggacagggcccagtgtgttgac
atagtcttcggtccccagaccctgcaccgcctgcccgacatgattgaacaggtccgcaat
ggcgacaaggcggtaatcgacatctccttccccgagattgagaagttcgatcgcctgccc
gaaccccgcgccgaaggccccaccgctttcgtatccatcatggaaggttgcagcaagtac
tgctctttctgcgtggtgccctacacccgcggcgaggaagtgagtcgccccatggacgac
atcatccttgaaatcgcccaattggcggagcaaggggtacgtgaagtcaacctgctgggt
cagaacgtaaacgcctatcgcggtgccaagcatgacggcgagatctgcagctttgccgaa
ctgctgcgctacgtcgccgccatcgacggtatcgaccgcctgcgcttcaccaccagccat
ccgattgaattcactcaggacatcatagatgtctacgaggacacccctgagctggtgagc
ttcctgcacctgccggtgcaatcgggttcggatcgcatcctgaccgccatgaagcgcggc
cacatggccattgaatacaagtccatcattcgccgcctgcgcaaggcccgtccggacatt
cagattagctcggatttcatcataggtttccccggtgaaacccaggatgacttcaacgac
accatgaagttgattgaggatgtgggcttcgaccacagcttcagctttatctacagcgcc
cgccccggcaccccggcagcggatctgccggacgatgtcgatatggaagaaaagaaacaa
cgtctggcacagctgcaggacaagatcaccaaccaagccatgcgctacagccgccagatg
ctcggcacagtgcagcgcatcctggtggaaggcccttcggtgaagaaccccatggaactg
cgtggccgcaccgaaaacaaccgggtggtgaacttcgaaggccaacccaagcacataggc
agctttgtcgatgtggaaatcgttgatgtctacaccaactccctgcgcggcaagtttatc
cgcggtgaggatgaaatggatctgcgccgcagcctgcgtccggaagacatattggccaaa
cgccagcaggacgatgccctgggcgtaagcaagtttatcccttaa
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