Shewanella cyperi: JYB88_13420
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Entry
JYB88_13420 CDS
T07829
Symbol
rsuA
Name
(GenBank) 16S rRNA pseudouridine(516) synthase RsuA
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scyp03009
]
JYB88_13420 (rsuA)
Enzymes [BR:
scyp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
JYB88_13420 (rsuA)
Ribosome biogenesis [BR:
scyp03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
JYB88_13420 (rsuA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF1062
Motif
Other DBs
NCBI-ProteinID:
QSX29212
UniProt:
A0A974XIU6
LinkDB
All DBs
Position
complement(3050721..3051449)
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AA seq
242 aa
AA seq
DB search
MSPLQPILTGVSVRLDKFLAEATGLSRSIAKKAMHAGEVTCDGVMVKDPAFKVTADTRVC
LDGEQVALVGVRYLMLNKPVDTICSTVDEHYPSVISALDIPRPDKLHIAGRLDVDTTGLV
LITDDGQWSHKVTSPKKECGKRYLVQLADPLDASLIETFAAGIELRNEDGPTKPALLELI
DRHQARLTITEGKYHQVKRMFAAVGNKVVKLHREAIGTIELDPNLAPGEWRYLTAVEIAS
VG
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccctgcaacctattttgactggagtttccgtgcgtttggataaatttttggcc
gaggccacggggcttagccgttcgattgccaaaaaggccatgcatgcaggggaagtcacc
tgtgatggcgtgatggtgaaagacccggcattcaaggtcacggccgatacccgggtgtgt
ctggatggtgagcaggtggcgctggtgggggtacgttacctgatgctgaataaacccgtg
gacaccatttgctccacagtggatgagcattatccgtcggttatttccgccttggacatt
ccccgccccgataaactgcacattgccgggcgactggatgtggataccacgggattggtg
ctgataacagatgatggccagtggtcccacaaggtgacttcacccaagaaagagtgtggt
aaacgctacctggtgcaactggccgatccccttgatgcaagcctcatcgaaacctttgcc
gcaggcatagagttaagaaatgaagatggccccaccaagccggcattgctggaattgatt
gaccgtcaccaggccagattgaccatcaccgagggtaaataccatcaggttaagcgtatg
ttcgccgctgtgggcaacaaggtggtgaagctgcatcgggaagccatagggaccatagaa
cttgacccgaacctggctcccggcgagtggcgctatttgaccgctgtcgaaatagcctct
gttggttga
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