Shewanella cyperi: JYB88_13445
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Entry
JYB88_13445 CDS
T07829
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyp02000
]
JYB88_13445
Transporters [BR:
scyp02000
]
Other transporters
Pores ion channels [TC:
1
]
JYB88_13445
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QSX29217
UniProt:
A0A975AJF4
LinkDB
All DBs
Position
complement(3055536..3058085)
Genome browser
AA seq
849 aa
AA seq
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MKRPLLMPSACALAVAFAMPSMVFAADDGAKVERIEVTGSRIKRTDIEGPSPIQSIDKDD
IANMGFDNLQQLLERMPANGAGAFSTRGNSQDSTANGSASISLRGMGPDATLVLINGRRV
AISSFAEGVSNSFVDINNIPVSAIERIDILKDGASAIYGSDAIAGVVNIVLKKDIEGLEL
NLGYGEASGTNYDEKTASMVWGTKSDKGSASVIVDYFKNSTLAASELGRFGTANQKPYGG
DDNRSSRGYPGYFYVDGVKTTDPACPPENTTSTGSCLFDYGPYNLTIPQAERVGAIGQFE
YFLGEDLTAFLEFSVQHNNSEAGGAATPLDETAGLTVPESHPNNPFGMDIQIGRYRPVDA
GARRWDIESDTMRMVAGLRGTVKEWDWEVSAQKGRQKQIQSGDRSQGWVRVDYLQREIDA
GRYNPFGAAVNSPEVIDAITTSLVRQGVSRMTAYDASITGQAFTLADRDIMMAAGLEYRE
EDVSDVPDEQFQRGLIFGTEAVSAAANRDQWAAYVEFSIPVTDNFELQLAGRYDNYSDFG
STTNPKVAFQWGITDSLTARGSWATGFRAPSLAQIGLGPSQESLFLDDYYFCEANGLDPA
GCKNLDFDFEFSGNPDLDAEESESWNLGLIWAPSQSFDIGLDAFKITQDNKIDKLEPQAV
YDANCGDQNSTICQRLAPIGSDTMGTIDKVLSSFVNLSSQEVEGVDLSTHYTMGLDSYGD
VKFGLEWSYLHKFEKGDVDWTGEYRFPQHRWLATTNWNMDAFAANLNFTYIGEFNDYNKT
RTVDAQLLVDASASYRFSETLKWTVGINNLLDEEPPFAIGDGDTDLYGYVQATHNPMGRY
IYTKVQVNF
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagacctctgttaatgccaagtgcctgcgcactggccgtcgcatttgccatgccc
tcaatggtgtttgctgcggatgacggtgccaaggttgaacgtatcgaagtgaccggttct
cgcatcaagcgtaccgatatcgaaggtccttctcctatccagtcaatcgacaaagacgac
attgccaacatgggctttgacaacctgcaacagttgctggagcgtatgcccgccaacggt
gcaggtgccttctccacccgtggtaacagtcaggattccactgccaacggttccgcctcc
atcagtttgcgcggtatgggaccggacgcgaccctggtgctgattaacggtcgccgtgtg
gctatcagctcgtttgcagaaggcgtgagcaactccttcgttgatatcaacaacatccct
gtatccgccattgagcgtatcgatattctgaaagatggcgcttcagccatttacggctcc
gacgccatcgccggtgtggtcaacattgtacttaaaaaggatatcgaagggcttgagctc
aacctaggttatggtgaagcttcgggcaccaattacgatgaaaaaaccgccagtatggtt
tggggtaccaagtccgataagggcagcgcttcggtcatagtggattactttaaaaacagc
acacttgcagccagtgaattgggccgtttcggtaccgccaatcaaaaaccttatggtggc
gacgataaccgttcctcccgtggttaccctggctatttctatgttgatggtgtaaagacc
acagatcctgcttgcccaccagaaaacaccactagtactggtagctgtttgtttgactac
ggtccatataacctgactatcccgcaagcggagcgcgtcggtgccataggccagtttgag
tacttccttggtgaagatttgactgcgttcctcgagttctcggtgcaacataacaattct
gaagccggcggtgctgcgacgccactggatgaaactgctggtttgacagtgcccgagtca
catccaaataacccctttggtatggatatccaaattggccgctaccgtccggtggatgcc
ggtgcccgtcgctgggacattgaatccgacaccatgcgtatggttgccggtcttcgtggc
acagtgaaagagtgggactgggaagtatccgctcagaaaggccgccagaagcaaatccaa
agcggcgaccgcagccagggttgggtgcgtgtagactacctgcagcgtgaaattgacgcc
ggtcgttacaatccgttcggcgccgcagtcaactctcctgaagtgattgatgccatcacc
accagtttggtgcgtcaaggggtttcccgtatgaccgcctatgatgccagcatcacggga
caagccttcaccctggctgaccgggatatcatgatggccgctggtttggagtaccgtgaa
gaagatgtcagtgacgtaccggatgagcaattccagcgtgggctgatattcggtaccgaa
gcggtatctgccgcggcaaacagggaccagtgggcggcctacgtggaattttccattccc
gtaaccgacaactttgaactgcagcttgccggtcgttatgacaattacagtgattttggt
tctactaccaaccccaaggttgctttccagtggggtatcacagattcgctgacggcccgt
ggctcttgggcaaccggtttccgcgcgccatctctggcacagataggcttaggcccttca
caggaaagtctgttcctggacgactattacttctgtgaagccaatggccttgatcctgca
gggtgtaaaaacctggactttgactttgaattttccggcaacccggatttggatgctgaa
gagtcagaaagttggaacctggggctgatttgggcacccagccagtcattcgatatcgga
ctggatgcgttcaaaattactcaggacaacaagatcgacaagttggagcctcaagccgta
tatgatgccaactgcggcgatcagaacagcaccatttgtcaacgtttggcccctatcggt
tcagacaccatgggtactattgataaagtactgtccagcttcgttaacttaagctctcaa
gaggttgagggtgtggatttgtccacccattacaccatgggtctcgacagctatggtgac
gtgaagttcggccttgagtggagctatctgcacaagtttgagaagggggatgttgattgg
accggtgaataccgattcccacaacatcgctggttagcgaccaccaactggaacatggat
gccttcgctgccaaccttaacttcacttatatcggcgagtttaacgattacaacaagacc
cgcactgtggatgcccagttgctggtggacgcctctgcctcctatcgcttcagcgagaca
ctcaagtggacagttggtataaataacctgctggatgaagagccaccatttgccatcggt
gatggtgataccgacctgtatggttatgtgcaagcaacacataacccaatgggacgctac
atctataccaaggtacaggttaacttctaa
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