Shewanella cyperi: JYB88_13850
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Entry
JYB88_13850 CDS
T07829
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
scyp
Shewanella cyperi
Pathway
scyp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JYB88_13850
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scyp01007
]
JYB88_13850
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scyp03016
]
JYB88_13850
Enzymes [BR:
scyp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
JYB88_13850
Amino acid related enzymes [BR:
scyp01007
]
Aminoacyl-tRNA synthetase
Class I (U)
JYB88_13850
Transfer RNA biogenesis [BR:
scyp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
JYB88_13850
Prokaryotic type
JYB88_13850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
HTH_Cmi2_C
tRNA-synt_1f
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
QSX29289
UniProt:
A0A974XRR8
LinkDB
All DBs
Position
3147340..3150219
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AA seq
959 aa
AA seq
DB search
MEKTYNPQSIEQALYRVWEEKGYFKPHGDESQGNYCIMIPPPNVTGSLHMGHAFQDTIMD
TLIRYQRMKGKNTLWQVGTDHAGIATQMLVERKLEAEEGKSRHDLGRDAFMDKVWEWKGQ
SGGTITSQLRRMGASVDWDRERFTMDEGLSAAVQEVFVRLYKDELIYRGKRLVNWDPKLH
TAISDLEVENKEKAGHMWHFRYPLAGTELTADGKDYLVVATTRPETMLGDSAVAVHPEDE
RYASLIGKEIILPIVNRRIPIIADEYVDKEFGTGCVKITPAHDFNDYEVGKRHNLPMFNI
LTIDAAIRAVAEVLNSDGSHNSELDATLPERYAGLDRFKARDAVVAEFETLGLLEKIDPH
ALKVPYGDRSGVVIEPLLTDQWYVAVQKLAQPAIEAVENGDIKFVPQQYENMYFSWMRDI
QDWCISRQLWWGHRIPAWYDEAGKVYVGRSEDEVRQNHNLGADVKLRQDDDVLDTWFSSA
LWTFSTLGWPEETPELKTFHPTDVLVTGFDIIFFWVARMIMMTMYFVKDEDGKPQVPFKT
VYVTGLIRDEQGNKMSKSKGNVLDPLDMIDGIDLESLVAKRTGNLMQPQLAAKIEKSTRK
EFENGIEPHGTDALRFTLAAMASTGRDINWDMKRLDGYRSFCNKLWNASRYVLMNTEEQD
CGPNSPNGKPGGEMKLSLADRWVIGKFQETVKSFDEHINAYRFDLAANTLYEFTWNQFCD
WYLELTKPVLQNGSEAEQRGTRHTLVTVLEQLLRLMHPMMPYITETIWDRVKPLAGVEGE
TLMLMSFPEFDAAKVDAKAMNDLEWVKQVIVAVRNIRAELNIAPSKPLAALLRGVSSEDK
ARIEANQAFFGTLAKLESMTILADGEAAPMATTQLIGEMELLIPMAGLIDVAAEMARIDK
QLEKLSGEVARIEGKLSNEGFVAKAPAEVIEKERAKAADLKRDMDKLAEQKVELAKLEA
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaacatacaatccgcagtccatagaacaggccctctaccgcgtttgggaagag
aaaggttacttcaagccacacggtgacgagtcccaaggcaactattgcatcatgatcccg
ccgccgaacgtcaccggcagcctgcacatgggtcacgccttccaggacaccataatggac
accctgatccgctatcagcgcatgaagggcaagaacaccctgtggcaggtgggcacggat
cacgcgggtatcgccacccaaatgctggttgagcgcaagctggaagccgaagaaggcaag
agccgccacgatctgggccgcgacgcctttatggacaaggtatgggagtggaaaggtcaa
tccggcggcaccattaccagccagctgcgtcgcatgggcgcgtcggtggactgggatcgc
gagcgtttcaccatggacgaaggcctgtcggccgcggtgcaggaagtgttcgtgcgcctg
tacaaggatgaactgatttaccgcggcaagcgcctggtgaactgggatcccaagctgcat
accgccatttccgatctggaagtggaaaacaaggaaaaagccggccacatgtggcacttc
cgctatccgctggccggcactgagctgaccgccgatggcaaagactacctggtagtggcc
accacccgccccgagaccatgctcggcgacagcgccgtggccgtgcatcccgaggacgag
cgttatgcctccctgattggcaaggaaatcatactgccgatcgttaaccgccgtatcccc
atcattgccgatgaatacgtcgacaaggaattcggtaccggctgcgtgaagatcaccccg
gcacacgacttcaacgattacgaagtgggcaagcgtcacaacctgcccatgttcaacatt
ctcaccatagatgccgccatccgcgccgtggccgaggtgctgaacagcgacggcagccac
aacagcgagctggacgctaccctgcccgagcgttatgccggtctggaccgcttcaaggcc
cgcgatgccgtggtggccgaatttgaaaccctgggcctcttggaaaaaatcgacccacac
gccctcaaggtgccctacggcgaccgctccggcgtggtgatcgaaccgctgttgaccgac
caatggtatgtggcggtacagaagctggcccagcccgccatcgaagcggtggaaaacggc
gacatcaagttcgtgccccagcaatacgaaaacatgtacttctcctggatgcgcgacatt
caggactggtgtatctcccgtcagctgtggtggggtcaccgtattcccgcctggtacgac
gaagccggtaaggtgtacgtgggtcgcagcgaagacgaagtgcgccagaaccataacctc
ggtgccgacgttaagctgcgccaggacgacgacgtgctcgacacctggttctcctccgcc
ctgtggaccttctctaccctgggctggccggaagaaacgccagagctcaagaccttccac
cccacagacgtgctggtgaccggctttgacatcatcttcttctgggttgcccggatgatc
atgatgaccatgtacttcgttaaagacgaagacggcaagccccaagtgccgttcaagacg
gtttacgtgaccggtcttatccgcgacgagcagggcaacaagatgtccaagtccaagggt
aacgtactggacccgctggacatgatcgacggtatcgaccttgagtccctggtggccaag
cgtaccggcaacctgatgcaaccccagctcgccgccaagattgaaaagagcacccgcaag
gagttcgaaaacggtatcgagccacacggcacagatgcactgcgctttaccctggcggcc
atggcctctaccggccgtgacatcaactgggacatgaagcgcctcgacggttaccgcagc
ttctgtaacaagctgtggaacgcttcccgctatgtgctgatgaacaccgaagagcaggat
tgtggccccaattctccaaacggaaagccgggtggcgagatgaagctgtcactggccgac
cgctgggtgatcggcaagttccaggaaaccgtcaagagcttcgacgagcacatcaatgcc
tatcgcttcgatctcgccgccaacaccctgtacgagttcacctggaaccagttctgtgac
tggtacctggagctgaccaagcccgtactgcaaaacggctccgaggccgagcagcgcggc
acccgtcatactctggtgactgtgctggagcaactgctgcgcctgatgcaccccatgatg
ccgtacatcacggaaaccatctgggatcgcgtcaagccgctggcaggcgttgaaggtgag
acattgatgctgatgtccttccccgagttcgatgccgccaaggtggatgccaaggccatg
aatgatctcgagtgggtcaagcaggtgattgtggccgtgcgcaacatccgcgccgagctc
aacattgccccaagcaagccgctggcggcactgctgcgcggcgtaagcagcgaagacaag
gcccgcatcgaagccaaccaggccttcttcgggacgcttgccaagctggaaagcatgacc
atactggccgacggcgaagccgcccccatggccaccactcagctgattggtgaaatggag
ctgctgatccccatggccggtcttatcgacgtggccgccgaaatggcccgtatcgacaag
cagctggagaagctgtccggtgaagtggcccgtatcgaaggcaagctgtccaatgaaggc
tttgtggccaaggcccctgcggaagtgattgagaaagagcgcgccaaggccgccgatctc
aagcgcgatatggacaagctggccgagcagaaggtcgaactggccaagctggaagcctga
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