Shewanella cyperi: JYB88_14325
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Entry
JYB88_14325 CDS
T07829
Name
(GenBank) rRNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scyp03009
]
JYB88_14325
Enzymes [BR:
scyp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
JYB88_14325
Ribosome biogenesis [BR:
scyp03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
JYB88_14325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QSX29371
UniProt:
A0A975AK49
LinkDB
All DBs
Position
3254579..3255316
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AA seq
245 aa
AA seq
DB search
MRLAKFLAHAGVASRRQACRLIEAGRVTLDGRPAKHTDEVPVANDQTGEVPVNDQSGIIV
CVDGKPVSLPCHHSYWLYHKPVGIDCRLRPEDPASLLHLLPTGARVYPAGRLDKDSRGLL
LLSDDGELTQRLMHPDYHHEKGYLVTLNKAVSQSALDTVAQGLDYGEGMTRPCRMCLVAP
DRVRMWLTEGKKRQIRRMWRAQGYRVEDLLRESLMGLTLDGLQEGQFRPLSQTEINQLKK
QTGLE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcgactcgccaagtttctcgcccatgcaggtgtcgcctcaagacgtcaggcctgccgc
ctgatagaggccggcagggtgaccctggatggacggccagccaagcacacggacgaagtg
cctgtagcgaatgatcagacaggcgaagtgcctgtaaatgatcaatccggcataatcgtg
tgcgtcgatggcaagccggtgtccctgccctgccaccacagctactggctgtatcacaag
cccgtcggtattgactgtcgcttgcggcccgaagatcccgccagtttgctgcacctgtta
cccaccggcgccagggtttatcccgcaggacggctggacaaggactcccgcggcttgctg
ctgctcagcgacgatggcgagctgacccagcgtctgatgcacccggattaccaccatgaa
aaaggctatctggtgaccctgaataaggctgtgtcgcaatcggctttggacacagtggca
cagggactggattacggggagggcatgacccgcccctgtcggatgtgtttggttgcaccg
gatagggtgcgcatgtggcttaccgaggggaaaaaacgccagatacgccgtatgtggcgt
gcacagggttacagggttgaggatttattgcgggagtccttgatggggctgacgctggat
ggactgcaggaaggtcaattccgtcccctgtcccagaccgaaattaaccagttaaaaaaa
caaacggggctggaatag
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