Shewanella cyperi: JYB88_15400
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Entry
JYB88_15400 CDS
T07829
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
scyp
Shewanella cyperi
Pathway
scyp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JYB88_15400 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scyp03019
]
JYB88_15400 (groL)
03110 Chaperones and folding catalysts [BR:
scyp03110
]
JYB88_15400 (groL)
03029 Mitochondrial biogenesis [BR:
scyp03029
]
JYB88_15400 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scyp04147
]
JYB88_15400 (groL)
Enzymes [BR:
scyp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
JYB88_15400 (groL)
Messenger RNA biogenesis [BR:
scyp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
JYB88_15400 (groL)
Chaperones and folding catalysts [BR:
scyp03110
]
Heat shock proteins
HSP60 / Chaperonin
JYB88_15400 (groL)
Mitochondrial biogenesis [BR:
scyp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
JYB88_15400 (groL)
Exosome [BR:
scyp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
JYB88_15400 (groL)
Exosomal proteins of other body fluids (saliva and urine)
JYB88_15400 (groL)
Exosomal proteins of breast cancer cells
JYB88_15400 (groL)
Exosomal proteins of colorectal cancer cells
JYB88_15400 (groL)
Exosomal proteins of bladder cancer cells
JYB88_15400 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QSX29563
UniProt:
A0A974XLP6
LinkDB
All DBs
Position
complement(3470741..3472381)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKEVKFGNDARVKMLAGVNVLANAVKVTLGPKGRNVVLEKSFGAPLITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKALSQECADSKAIAQVGTISANSDESIGQIIATAMEKVGKEGVITVEEG
QALENELDVVEGMQFDRGYLSPYFINKPETGSVELDHPFVLLVDKKISNIRELLPILEGL
AKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
IAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQEQIKARVGQIKQQIEETTSDY
DKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RVASKIANVEVANEDQKHGVVIALRAMEAPLRQIATNAGEEASVVANNVKNGSGNYGYNA
GNDTYGDMLEMGILDPTKVTRSALQFASSVAGLMITTEAMVAELPKPEAGPDMGGMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagttaaatttggcaatgacgctcgcgtgaaaatgctcgccggtgtg
aacgtactggccaacgcggtaaaagtgaccctgggtcccaagggccgcaacgtggtgctg
gaaaagagcttcggcgcgccgctgatcaccaaagacggtgtatccgtggccaaagaaatc
gaactggaagacaagttcgagaacatgggcgcccagatggtgaaggaagtggcttccaag
gccaacgacgccgccggtgacggtaccaccactgcgaccgttctggctcaagccattgtt
aacgaaggtctgaaggccgttgccgccggtatgaacccaatggatctgaagcgcggtatc
gacaaagccgttatcgccgccgtggaagaactcaaagccttgtcccaggaatgtgccgac
tccaaggccattgcccaggtaggtaccatctccgccaactctgacgagtccatcggtcag
atcatcgccaccgccatggaaaaagtgggcaaggaaggcgtgattaccgttgaagaaggt
caggcgctggaaaacgagctggatgtggttgaaggtatgcagttcgaccgtggctacctg
tctccttacttcatcaacaagccagaaaccggttcagtggaactggaccaccccttcgtg
ctgctggtggacaagaagatctccaacatccgcgaactgctgcctatcctcgaaggtctg
gccaaaaccggtaagccgctgctgatcgtggccgaagacgtggaaggcgaagccctggcg
actctggttgtgaacaacatgcgcggtatcgtgaaagttgccgccgttaaggcccctggc
tttggtgaccgtcgcaaggccatgctgcaggatatcgccatcctgaccggtggtactgtg
atcgccgaggaaatcggtctggaactggaaaaagccaccctggaagacctgggtaccgcc
aagcgtgtggtcatcaccaaggacaacaccaccatcatcgatggtaacggcgagcaagag
cagatcaaggctcgcgtgggtcagatcaagcaacagatcgaagaaaccacttccgactac
gacaaggaaaaactgcaagagcgtatggccaaactggccggcggtgttgccgtgatcaag
gttggcgctgccaccgaagtggaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgctacccgcgccgccgttgaggaaggtgtggtaccaggcggcggtgtggccctggtg
cgcgttgcttccaagattgccaacgttgaagtggccaacgaagatcagaagcacggtgtg
gttatcgccctgcgcgccatggaagccccactgcgtcaaatcgccaccaacgccggcgaa
gaggcctctgtggttgccaacaacgtcaagaacggctcaggtaactacggttacaacgcc
ggtaacgacacctacggcgacatgctggaaatgggtatcctggacccaaccaaggtaacc
cgctctgcgctgcagttcgcctcttccgtggccggtctgatgatcaccacagaagccatg
gtagccgagctgccaaagcctgaagccggcccagatatgggcggcatgggtggtatgggt
ggtatgggcggcatgatgtaa
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